DRSC/TRiP Functional Genomics Resources

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Protein Alignment SMARCA1 and Etl1

DIOPT Version :10

Sequence 1:NP_001269803.1 Gene:SMARCA1 / 6594 HGNCID:11097 Length:1070 Species:Homo sapiens
Sequence 2:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster


Alignment Length:733 Identity:235/733 - (32%)
Similarity:352/733 - (48%) Gaps:171/733 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    78 EMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSAQK-----------SPTSPLNMKLGRPRIK 131
            :.|.|...||...|.|.|:|:.:.:.:....::..::|           |..|.|..||...|:.
  Fly   171 DSDSEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMS 235

Human   132 KD---------EKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVS----------PSY 177
            .|         .||:.::|               :||   |.:|:..|.|.:          |..
  Fly   236 GDLLNYAQELINKQNTVAA---------------ILS---KCNNMVSRLEKAISNGAGIVEQPKL 282

Human   178 VKGG-PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK 241
            :..| .|.||||.|||||..:::..:|||||||||||||:|.||.|.|||........|:::||.
  Fly   283 LSSGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPS 347

Human   242 STLHNWMNEFKRWVPSLRVICFVGDKD----ARAAFIRDEMMPGEWDVCVTSYEMV---IKEKSV 299
            |||.||..|..||.|.|.|..:.|.:|    .|..|.:|...  .:||.:|:|.:|   .:|:.:
  Fly   348 STLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGFT--GFDVLLTTYHIVGSTPEERKM 410

Human   300 FKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVF-N 363
            |:.....|::.||||.:||..::....:....:..|:|||||||||||.||.:||.|::|..| .
  Fly   411 FRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAK 475

Human   364 SADDFDSWFDTK-NCLGDQ--------KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGL 419
            |.:|..|.|..| ...|||        ..::|...::|||:|||:|.||.|:||.|..:...:.:
  Fly   476 SIEDIKSLFAKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPM 540

Human   420 SKMQREWYTKILMKDIDVL-NSSGKM---DKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTD-- 478
            |..|:.:|.::    :|.. |:.|::   .:...:.|:|::|:..|||.|.      ..|.||  
  Fly   541 SSQQKIYYHEL----VDYYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLM------RHYFTDAN 595

Human   479 -------------------------------------------------EHIVSNSGKMVVLDKL 494
                                                             ::::.:|||.:.||.|
  Fly   596 LRGFSKRLANASSFKKTNEQYIFEELAVMSDFQVYQMMNKHEFYDVKIPDNLICDSGKFLYLDTL 660

Human   495 LAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEA 559
            |.|||.:|.|||:|||.|.:|||:|:|...|.:.:|||||.|....|:|            .|..
  Fly   661 LPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQD------------LITD 713

Human   560 FNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLIT 624
            ||. :.|.|:|:|||:|||:||||.:||..:::|.|:||..|.||.||.||:||::||.::|||:
  Fly   714 FNG-DDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLIS 777

Human   625 DNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELTDEDI 689
            ::|:||.|:..||.||:|:.         |..||:           .|..|     |.....:.:
  Fly   778 ESTIEEGILMAAEEKLKLEK---------DITSNE-----------KGEVH-----EQRCVVKLL 817

Human   690 TTILERGEKKTAEMNERL 707
            ||.|...:.:..::|..|
  Fly   818 TTALGLDKDQEEQLNNSL 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMARCA1NP_001269803.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..82 1/3 (33%)
PLN03142 87..1069 CDD:215601 232/724 (32%)
DEAH box 311..314 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 831..861
Etl1NP_609320.2 ComEA <192..233 CDD:441164 6/40 (15%)
HepA <276..795 CDD:440319 198/543 (36%)
Blue background indicates that the domain is not in the aligned region.

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