DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNAI2 and snai2

DIOPT Version :10

Sequence 1:NP_003059.1 Gene:SNAI2 / 6591 HGNCID:11094 Length:268 Species:Homo sapiens
Sequence 2:NP_989424.1 Gene:snai2 / 395065 XenbaseID:XB-GENE-487371 Length:266 Species:Xenopus tropicalis


Alignment Length:268 Identity:239/268 - (89%)
Similarity:250/268 - (93%) Gaps:2/268 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPRSFLVKKHFNASKKPNYSELDTHTVIISPYLYESYSMPVIPQPEILSSGAYSPITVWTTAAPF 65
            ||||||||||||::|||||.|||.|||||||:|||.|.:.|:||||:.||.|||||||||  ...
 Frog     1 MPRSFLVKKHFNSAKKPNYGELDNHTVIISPFLYERYPVSVLPQPELYSSVAYSPITVWT--GLL 63

Human    66 HAQLPNGLSPLSGYSSSLGRVSPPPPSDTSSKDHSGSESPISDEEERLQSKLSDPHAIEAEKFQC 130
            |..||:.|||||||.||||||||||.|||||||||||||||||||||||:||||.||||||||||
 Frog    64 HPPLPSDLSPLSGYPSSLGRVSPPPQSDTSSKDHSGSESPISDEEERLQTKLSDSHAIEAEKFQC 128

Human   131 NLCNKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFS 195
            :||:||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||
 Frog   129 SLCSKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCEKEYVSLGALKMHIRTHTLPCVCKICGKAFS 193

Human   196 RPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHE 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   194 RPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHE 258

Human   261 ESGCCVAH 268
            ||||||||
 Frog   259 ESGCCVAH 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNAI2NP_003059.1 SNAG domain. /evidence=ECO:0000250|UniProtKB:O95863 1..20 16/18 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..117 33/36 (92%)
SFP1 <101..182 CDD:227516 75/80 (94%)
C2H2 Zn finger 130..150 CDD:275370 17/19 (89%)
C2H2 Zn finger 161..181 CDD:275368 18/19 (95%)
C2H2 Zn finger 187..207 CDD:275368 19/19 (100%)
zf-H2C2_2 200..223 CDD:463886 22/22 (100%)
zf-C2H2 213..235 CDD:395048 21/21 (100%)
C2H2 Zn finger 215..235 CDD:275368 19/19 (100%)
C2H2 Zn finger 243..259 CDD:275368 15/15 (100%)
snai2NP_989424.1 C2H2 Zn finger 128..148 CDD:275370 17/19 (89%)
C2H2 Zn finger 159..179 CDD:275368 18/19 (95%)
C2H2 Zn finger 185..205 CDD:275368 19/19 (100%)
zf-H2C2_2 198..221 CDD:463886 22/22 (100%)
zf-C2H2 211..233 CDD:395048 21/21 (100%)
C2H2 Zn finger 213..233 CDD:275368 19/19 (100%)
zf-H2C2_2 225..250 CDD:463886 24/24 (100%)
C2H2 Zn finger 241..257 CDD:275368 15/15 (100%)

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