Sequence 1: | NP_001258875.2 | Gene: | SLIT3 / 6586 | HGNCID: | 11087 | Length: | 1530 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261017.1 | Gene: | sli / 36746 | FlyBaseID: | FBgn0264089 | Length: | 2157 | Species: | Drosophila melanogaster |
Alignment Length: | 1540 | Identity: | 654/1540 - (42%) |
---|---|---|---|
Similarity: | 923/1540 - (59%) | Gaps: | 117/1540 - (7%) |
- Green bases have known domain annotations that are detailed below.
Human 3 PGWAGVGAAVRARLALALALASVLSGPPAVACPTKCTCSAASVDCHGLGLRAVPRGIPRNAERLD 67
Human 68 LDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQST 132
Human 133 PKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRIL 197
Human 198 VTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVADVQKKEYV 262
Human 263 CP--APHSEPPSCNANSISCPSPCTCSNNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAG 325
Human 326 AFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANK 390
Human 391 INCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQNPFVCDCHLKWLADYLQDN 455
Human 456 PIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSN 520
Human 521 QKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQE 585
Human 586 LMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFT 650
Human 651 TLVSLSTINLLSNPFNCNCHLAWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCDGNE 715
Human 716 ESSCQLSPRCPEQCTCMETVVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPRE-LSALRHLTL 779
Human 780 IDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN 844
Human 845 DLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLTTPTHRFQCKVLW 909
Human 910 FCCPGPVDINIVAKCNACLSSPCKNNGTCTQDPVELYRCACPYSYKGKDCTVPINTCIQNPCQHG 974
Human 975 GTCHLSDSHKDGFSCSCPLGFEGQRCEINPDDC-EDNDCENNATCVDGINNYVCICPPNYTGELC 1038
Human 1039 DEVIDHCVPELNLCQHEAKCIPLDKGFSCECVPGYSGKLCETDN-DDCVAHKCRHGAQCVDTING 1102
Human 1103 YTCTCPQGFSGPFCE--HPPPMVLLQTSPCDQYECQNGAQCIVVQQEPT---CRCPPGFAGPRCE 1162
Human 1163 KLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGDNDPLALELYQGHVRLVYDSL 1227
Human 1228 SSPPTTVYSVETVNDGQFHSVELVTLNQTLNLVVDKGTPKSLGKLQKQPAVGINSPLYLGGIPTS 1292
Human 1293 TGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCRSVEKD- 1356
Human 1357 -SVVCECRPGWTGPLCDQEARDPCLGHRCHHG-KCVATGTS---YMCKCAEGYGGDLCDNKNDSA 1416
Human 1417 NACSAFKCHHGQCHISDQGEPYCLCQPGFSGEHCQQENPCLGQVVREVIRRQKGYASCATASKVP 1481
Human 1482 IMECRGGCGPQCCQPTRSKRRKYVFQCTDGSSFVEEVERHLECGC 1526 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SLIT3 | NP_001258875.2 | LRRNT | 33..64 | CDD:214470 | 13/30 (43%) |
LRR | <62..>220 | CDD:227223 | 74/157 (47%) | ||
LRR 1 | 62..83 | 10/20 (50%) | |||
leucine-rich repeat | 64..86 | CDD:275380 | 11/21 (52%) | ||
LRR 2 | 86..107 | 11/20 (55%) | |||
leucine-rich repeat | 87..110 | CDD:275380 | 14/22 (64%) | ||
internalin_A | 107..>478 | CDD:380193 | 191/372 (51%) | ||
LRR 3 | 110..131 | 11/20 (55%) | |||
leucine-rich repeat | 111..134 | CDD:275380 | 12/22 (55%) | ||
LRR 4 | 134..155 | 9/20 (45%) | |||
leucine-rich repeat | 135..158 | CDD:275380 | 10/22 (45%) | ||
LRR 5 | 158..179 | 10/20 (50%) | |||
leucine-rich repeat | 159..182 | CDD:275380 | 11/22 (50%) | ||
LRR 6 | 182..203 | 11/20 (55%) | |||
leucine-rich repeat | 183..206 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 207..308 | CDD:275380 | 46/102 (45%) | ||
LRR 7 | 308..329 | 9/20 (45%) | |||
leucine-rich repeat | 309..332 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 311..367 | CDD:338972 | 32/55 (58%) | ||
LRR 8 | 332..353 | 12/20 (60%) | |||
leucine-rich repeat | 333..356 | CDD:275380 | 14/22 (64%) | ||
LRR 9 | 356..377 | 12/20 (60%) | |||
leucine-rich repeat | 357..377 | CDD:275380 | 12/19 (63%) | ||
LRR 10 | 380..401 | 14/20 (70%) | |||
leucine-rich repeat | 381..404 | CDD:275380 | 15/22 (68%) | ||
LRR 11 | 404..425 | 11/20 (55%) | |||
leucine-rich repeat | 405..428 | CDD:275380 | 11/22 (50%) | ||
LRRNT | 505..535 | CDD:214470 | 14/29 (48%) | ||
LRR 12 | 533..554 | 8/20 (40%) | |||
LRR_8 | 534..593 | CDD:338972 | 24/58 (41%) | ||
leucine-rich repeat | 534..558 | CDD:275380 | 10/23 (43%) | ||
LRR 13 | 558..579 | 6/20 (30%) | |||
leucine-rich repeat | 559..582 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 582..641 | CDD:338972 | 16/58 (28%) | ||
LRR 14 | 582..603 | 6/20 (30%) | |||
leucine-rich repeat | 583..606 | CDD:275380 | 8/22 (36%) | ||
LRR 15 | 606..627 | 3/20 (15%) | |||
leucine-rich repeat | 607..630 | CDD:275380 | 3/22 (14%) | ||
LRR 16 | 630..651 | 9/20 (45%) | |||
leucine-rich repeat | 631..654 | CDD:275380 | 10/22 (45%) | ||
PCC | 636..>714 | CDD:188093 | 37/77 (48%) | ||
leucine-rich repeat | 655..745 | CDD:275380 | 40/89 (45%) | ||
LRRNT | 725..756 | CDD:214470 | 16/30 (53%) | ||
LRR | <743..>869 | CDD:227223 | 73/126 (58%) | ||
leucine-rich repeat | 746..776 | CDD:275380 | 12/30 (40%) | ||
LRR 17 | 753..775 | 7/22 (32%) | |||
LRR_8 | 776..835 | CDD:338972 | 36/58 (62%) | ||
LRR 18 | 776..797 | 13/20 (65%) | |||
leucine-rich repeat | 777..800 | CDD:275380 | 14/22 (64%) | ||
LRR 19 | 800..821 | 12/20 (60%) | |||
leucine-rich repeat | 801..824 | CDD:275380 | 14/22 (64%) | ||
LRR 20 | 824..845 | 15/20 (75%) | |||
leucine-rich repeat | 825..846 | CDD:275380 | 15/20 (75%) | ||
PCC | 830..>912 | CDD:188093 | 48/81 (59%) | ||
EGF_CA | 963..1001 | CDD:238011 | 14/37 (38%) | ||
EGF_CA | 1005..1038 | CDD:238011 | 17/33 (52%) | ||
EGF_CA | 1042..1079 | CDD:238011 | 14/36 (39%) | ||
EGF_CA | 1081..1117 | CDD:238011 | 18/36 (50%) | ||
EGF | 1130..1160 | CDD:333761 | 11/32 (34%) | ||
LamG | 1188..1321 | CDD:214598 | 47/132 (36%) | ||
EGF | 1379..1407 | CDD:333761 | 11/31 (35%) | ||
GHB_like | <1473..1528 | CDD:389804 | 16/54 (30%) | ||
sli | NP_001261017.1 | LRRNT | 73..103 | CDD:214470 | 13/29 (45%) |
leucine-rich repeat | 83..104 | CDD:275380 | 9/20 (45%) | ||
LRR_8 | 102..160 | CDD:290566 | 33/57 (58%) | ||
leucine-rich repeat | 105..125 | CDD:275380 | 9/19 (47%) | ||
LRR_RI | <119..259 | CDD:238064 | 66/139 (47%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 14/22 (64%) | ||
LRR_8 | 149..208 | CDD:290566 | 28/58 (48%) | ||
leucine-rich repeat | 150..173 | CDD:275380 | 12/22 (55%) | ||
leucine-rich repeat | 174..197 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 197..256 | CDD:290566 | 27/58 (47%) | ||
leucine-rich repeat | 198..221 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 222..245 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 246..371 | CDD:275380 | 55/126 (44%) | ||
LRRCT | 254..303 | CDD:214507 | 21/48 (44%) | ||
LRRNT | 319..350 | CDD:214470 | 15/30 (50%) | ||
LRR_8 | 349..406 | CDD:290566 | 32/56 (57%) | ||
LRR_4 | 371..411 | CDD:289563 | 25/39 (64%) | ||
leucine-rich repeat | 372..395 | CDD:275380 | 14/22 (64%) | ||
leucine-rich repeat | 396..415 | CDD:275380 | 11/18 (61%) | ||
leucine-rich repeat | 420..443 | CDD:275380 | 15/22 (68%) | ||
leucine-rich repeat | 444..465 | CDD:275380 | 11/20 (55%) | ||
leucine-rich repeat | 468..480 | CDD:275378 | 8/11 (73%) | ||
LRRCT | 476..525 | CDD:214507 | 30/48 (63%) | ||
leucine-rich repeat | 484..545 | CDD:275380 | 34/61 (56%) | ||
LRRNT | 542..574 | CDD:214470 | 14/31 (45%) | ||
leucine-rich repeat | 552..570 | CDD:275380 | 7/17 (41%) | ||
leucine-rich repeat | 572..596 | CDD:275380 | 10/23 (43%) | ||
LRR_RI | <574..>678 | CDD:238064 | 44/127 (35%) | ||
LRR_8 | 595..655 | CDD:290566 | 25/83 (30%) | ||
leucine-rich repeat | 597..620 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 621..644 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 645..668 | CDD:275380 | 13/46 (28%) | ||
leucine-rich repeat | 669..756 | CDD:275380 | 39/86 (45%) | ||
LRRCT | 677..726 | CDD:214507 | 22/48 (46%) | ||
LRRNT | 739..770 | CDD:214470 | 16/30 (53%) | ||
leucine-rich repeat | 757..791 | CDD:275380 | 13/33 (39%) | ||
LRR_4 | 770..807 | CDD:289563 | 18/36 (50%) | ||
LRR_8 | 790..850 | CDD:290566 | 37/59 (63%) | ||
LRR_4 | 791..830 | CDD:289563 | 24/38 (63%) | ||
leucine-rich repeat | 792..815 | CDD:275380 | 14/22 (64%) | ||
LRR_4 | 814..863 | CDD:289563 | 31/48 (65%) | ||
leucine-rich repeat | 816..839 | CDD:275380 | 14/22 (64%) | ||
leucine-rich repeat | 840..861 | CDD:275380 | 15/20 (75%) | ||
LRRCT | 872..920 | CDD:214507 | 28/47 (60%) | ||
EGF | 935..966 | CDD:278437 | 11/30 (37%) | ||
EGF_CA | 971..1007 | CDD:238011 | 14/37 (38%) | ||
EGF_CA | 1009..1045 | CDD:238011 | 18/35 (51%) | ||
EGF_CA | 1055..1086 | CDD:238011 | 12/31 (39%) | ||
EGF_CA | 1088..1124 | CDD:238011 | 17/35 (49%) | ||
Laminin_G_1 | 1204..1335 | CDD:278483 | 47/130 (36%) | ||
CT | 1435..1504 | CDD:214482 | 20/75 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 124 | 1.000 | Domainoid score | I5521 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4237 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1361 | 1.000 | Inparanoid score | I132 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3289 |
OMA | 1 | 1.010 | - | - | QHG45950 | |
OrthoDB | 1 | 1.010 | - | - | D20003at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001593 | |
OrthoInspector | 1 | 1.000 | - | - | otm40542 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103623 | |
Panther | 1 | 1.100 | - | - | O | PTHR45836 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3290 |
SonicParanoid | 1 | 1.000 | - | - | X1145 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.820 |