Sequence 1: | NP_003052.2 | Gene: | SLIT1 / 6585 | HGNCID: | 11085 | Length: | 1534 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001030140.1 | Gene: | slit1a / 556123 | ZFINID: | ZDB-GENE-030722-3 | Length: | 1524 | Species: | Danio rerio |
Alignment Length: | 1516 | Identity: | 1126/1516 - (74%) |
---|---|---|---|
Similarity: | 1286/1516 - (84%) | Gaps: | 6/1516 - (0%) |
- Green bases have known domain annotations that are detailed below.
Human 18 LWLLLWAAAWRLGASACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFA 82
Human 83 GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQA 147
Human 148 IPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRL 212
Human 213 HSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTL 277
Human 278 SSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSN 342
Human 343 NQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNL 407
Human 408 SLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRL 472
Human 473 ANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLKLTKIPER 537
Human 538 IPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLE 602
Human 603 SIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLN 667
Human 668 LLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQEEGGCLPRP 732
Human 733 QCPQECACLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKYLQLVDLSNNKIS 797
Human 798 SLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLA 862
Human 863 IGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQGPPTLAVQAKCD 927
Human 928 LCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGPCENGGTCHAQEGEDAPFTCS 992
Human 993 CPTGFEGPTCGVNTDDCVDHACANGGVCVDGVGNYTCQCPLQYEGKACEQLVDLCSPDLNPCQHE 1057
Human 1058 AQCVGTPDGPRCECMPGYAGDNCSENQDDCRDHRCQNGAQCMDEVNSYSCLCAEGYSGQLCEIPP 1122
Human 1123 HLPAPKSPCEGTECQNGANCVDQGNRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPR 1187
Human 1188 ANITLQVSTAEDNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELV 1252
Human 1253 AFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTGFHGCIRNL 1317
Human 1318 YINNELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPMCHCEAGWVGLHCDQPADGPCH 1382
Human 1383 GHKCVHGQCVPLDALSYSCQCQDGYSGALCNQAGALAEPCRGLQCLHGHCQASGTKGAHCVCDPG 1447
Human 1448 FSGELCEQESECRGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCPGQGCCQGLRLKRRKFTFEC 1512
Human 1513 SDGTSFAEEVEKPTKCGCALC 1533 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SLIT1 | NP_003052.2 | LRRNT | 33..64 | CDD:214470 | 24/30 (80%) |
leucine-rich repeat | 43..62 | CDD:275380 | 14/18 (78%) | ||
LRR_8 | 61..121 | CDD:290566 | 50/59 (85%) | ||
LRR 1 | 62..83 | 17/20 (85%) | |||
leucine-rich repeat | 63..86 | CDD:275380 | 18/22 (82%) | ||
LRR_4 | 64..101 | CDD:289563 | 29/36 (81%) | ||
LRR 2 | 86..107 | 17/20 (85%) | |||
LRR_RI | <87..220 | CDD:238064 | 116/132 (88%) | ||
leucine-rich repeat | 87..110 | CDD:275380 | 19/22 (86%) | ||
LRR_8 | 109..169 | CDD:290566 | 53/59 (90%) | ||
LRR 3 | 110..131 | 19/20 (95%) | |||
leucine-rich repeat | 111..134 | CDD:275380 | 20/22 (91%) | ||
LRR 4 | 134..155 | 19/20 (95%) | |||
leucine-rich repeat | 135..158 | CDD:275380 | 21/22 (95%) | ||
LRR 5 | 158..179 | 17/20 (85%) | |||
LRR_8 | 159..217 | CDD:290566 | 51/57 (89%) | ||
leucine-rich repeat | 159..182 | CDD:275380 | 18/22 (82%) | ||
LRR 6 | 182..203 | 18/20 (90%) | |||
leucine-rich repeat | 183..206 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 207..334 | CDD:275380 | 96/126 (76%) | ||
TPKR_C2 | 219..264 | CDD:301599 | 37/44 (84%) | ||
LRRNT | 282..313 | CDD:214470 | 20/30 (67%) | ||
LRR 7 | 310..331 | 17/20 (85%) | |||
LRR_8 | 312..369 | CDD:290566 | 51/56 (91%) | ||
LRR_4 | 334..373 | CDD:289563 | 36/38 (95%) | ||
LRR 8 | 334..355 | 18/20 (90%) | |||
leucine-rich repeat | 335..358 | CDD:275380 | 20/22 (91%) | ||
LRR 9 | 358..379 | 20/20 (100%) | |||
leucine-rich repeat | 359..379 | CDD:275380 | 19/19 (100%) | ||
LRR 10 | 382..403 | 14/20 (70%) | |||
leucine-rich repeat | 383..406 | CDD:275380 | 17/22 (77%) | ||
LRR_8 | 389..441 | CDD:290566 | 44/51 (86%) | ||
LRR 11 | 406..427 | 19/20 (95%) | |||
leucine-rich repeat | 407..428 | CDD:275380 | 18/20 (90%) | ||
leucine-rich repeat | 431..528 | CDD:275380 | 83/96 (86%) | ||
TPKR_C2 | 439..>469 | CDD:301599 | 26/29 (90%) | ||
LRRNT | 513..542 | CDD:214470 | 18/28 (64%) | ||
leucine-rich repeat | 529..566 | CDD:275380 | 22/36 (61%) | ||
LRR 12 | 541..562 | 13/20 (65%) | |||
LRR_RI | <544..627 | CDD:238064 | 66/82 (80%) | ||
LRR_8 | 544..601 | CDD:290566 | 46/56 (82%) | ||
LRR 13 | 566..587 | 19/20 (95%) | |||
leucine-rich repeat | 567..590 | CDD:275380 | 21/22 (95%) | ||
LRR_8 | 590..649 | CDD:290566 | 49/58 (84%) | ||
LRR 14 | 590..611 | 15/20 (75%) | |||
leucine-rich repeat | 591..614 | CDD:275380 | 17/22 (77%) | ||
LRR 15 | 614..635 | 18/20 (90%) | |||
LRR_4 | 615..654 | CDD:289563 | 32/38 (84%) | ||
leucine-rich repeat | 615..638 | CDD:275380 | 20/22 (91%) | ||
LRR 16 | 638..659 | 16/20 (80%) | |||
leucine-rich repeat | 639..660 | CDD:275380 | 16/20 (80%) | ||
leucine-rich repeat | 663..762 | CDD:275380 | 71/98 (72%) | ||
LRRCT | 671..719 | CDD:214507 | 37/47 (79%) | ||
LRRNT | 733..765 | CDD:214470 | 21/31 (68%) | ||
LRR_8 | 761..820 | CDD:290566 | 47/58 (81%) | ||
LRR 17 | 762..783 | 14/20 (70%) | |||
leucine-rich repeat | 763..785 | CDD:275380 | 14/21 (67%) | ||
LRR 18 | 785..806 | 17/20 (85%) | |||
LRR_4 | 786..827 | CDD:289563 | 36/40 (90%) | ||
leucine-rich repeat | 786..809 | CDD:275380 | 20/22 (91%) | ||
LRR 19 | 809..830 | 18/20 (90%) | |||
leucine-rich repeat | 810..830 | CDD:275380 | 17/19 (89%) | ||
LRR 20 | 833..854 | 17/20 (85%) | |||
leucine-rich repeat | 834..857 | CDD:275380 | 17/22 (77%) | ||
LRRCT | 866..915 | CDD:214507 | 41/48 (85%) | ||
EGF_CA | 927..962 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 966..1002 | CDD:238011 | 20/35 (57%) | ||
EGF_CA | 1005..1041 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 1044..1080 | CDD:238011 | 14/35 (40%) | ||
EGF_CA | 1085..1119 | CDD:238011 | 26/33 (79%) | ||
EGF_CA | <1136..1163 | CDD:238011 | 16/26 (62%) | ||
LamG | 1189..1322 | CDD:214598 | 104/132 (79%) | ||
slit1a | NP_001030140.1 | LRRNT | 26..57 | CDD:214470 | 24/30 (80%) |
leucine-rich repeat | 36..55 | CDD:275380 | 14/18 (78%) | ||
LRR_8 | 54..114 | CDD:290566 | 50/59 (85%) | ||
leucine-rich repeat | 56..79 | CDD:275380 | 18/22 (82%) | ||
leucine-rich repeat | 80..103 | CDD:275380 | 19/22 (86%) | ||
LRR_8 | 102..162 | CDD:290566 | 53/59 (90%) | ||
LRR_RI | <104..227 | CDD:238064 | 107/122 (88%) | ||
leucine-rich repeat | 104..127 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 128..151 | CDD:275380 | 21/22 (95%) | ||
leucine-rich repeat | 152..175 | CDD:275380 | 18/22 (82%) | ||
LRR_8 | 153..210 | CDD:290566 | 51/56 (91%) | ||
leucine-rich repeat | 176..199 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 200..327 | CDD:275380 | 96/126 (76%) | ||
TPKR_C2 | 208..257 | CDD:301599 | 39/48 (81%) | ||
LRRNT | 275..306 | CDD:214470 | 20/30 (67%) | ||
LRR_8 | 303..362 | CDD:290566 | 52/58 (90%) | ||
LRR_4 | 326..366 | CDD:289563 | 36/39 (92%) | ||
leucine-rich repeat | 328..351 | CDD:275380 | 20/22 (91%) | ||
LRR_8 | 350..434 | CDD:290566 | 73/83 (88%) | ||
leucine-rich repeat | 352..372 | CDD:275380 | 19/19 (100%) | ||
LRR_RI | <394..620 | CDD:238064 | 186/225 (83%) | ||
leucine-rich repeat | 400..423 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 424..521 | CDD:275380 | 83/96 (86%) | ||
leucine-rich repeat | 522..559 | CDD:275380 | 22/36 (61%) | ||
LRR_8 | 558..618 | CDD:290566 | 50/59 (85%) | ||
leucine-rich repeat | 560..583 | CDD:275380 | 21/22 (95%) | ||
leucine-rich repeat | 584..607 | CDD:275380 | 17/22 (77%) | ||
LRR_8 | 607..666 | CDD:290566 | 51/58 (88%) | ||
leucine-rich repeat | 608..631 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 632..653 | CDD:275380 | 16/20 (80%) | ||
leucine-rich repeat | 656..747 | CDD:275380 | 65/90 (72%) | ||
LRRCT | 664..712 | CDD:214507 | 37/47 (79%) | ||
leucine-rich repeat | 748..778 | CDD:275380 | 20/29 (69%) | ||
LRR_8 | 754..813 | CDD:290566 | 47/58 (81%) | ||
LRR_4 | 755..794 | CDD:289563 | 29/38 (76%) | ||
LRR_4 | 777..820 | CDD:289563 | 37/42 (88%) | ||
leucine-rich repeat | 779..802 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 803..823 | CDD:275380 | 17/19 (89%) | ||
leucine-rich repeat | 827..850 | CDD:275380 | 17/22 (77%) | ||
LRRCT | 859..908 | CDD:214507 | 41/48 (85%) | ||
EGF_CA | 920..955 | CDD:238011 | 15/34 (44%) | ||
EGF_CA | 958..996 | CDD:238011 | 20/37 (54%) | ||
EGF_CA | 998..1034 | CDD:238011 | 17/35 (49%) | ||
EGF_CA | 1078..1112 | CDD:238011 | 26/33 (79%) | ||
LamG | 1179..1312 | CDD:214598 | 104/132 (79%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C194329346 | |
Domainoid | 1 | 1.000 | 258 | 1.000 | Domainoid score | I9253 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4237 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2302 | |
Inparanoid | 1 | 1.050 | 2421 | 1.000 | Inparanoid score | I279 |
NCBI | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45950 | |
OrthoDB | 1 | 1.010 | - | - | D19272at7742 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001593 | |
OrthoInspector | 1 | 1.000 | - | - | oto49057 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103623 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45836 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3290 |
SonicParanoid | 1 | 1.000 | - | - | X1145 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 1 | 1.500 | - | - | ||
17 | 17.340 |