Sequence 1: | NP_003052.2 | Gene: | SLIT1 / 6585 | HGNCID: | 11085 | Length: | 1534 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510437.2 | Gene: | slt-1 / 181562 | WormBaseID: | WBGene00004854 | Length: | 1410 | Species: | Caenorhabditis elegans |
Alignment Length: | 1526 | Identity: | 568/1526 - (37%) |
---|---|---|---|
Similarity: | 793/1526 - (51%) | Gaps: | 165/1526 - (10%) |
- Green bases have known domain annotations that are detailed below.
Human 31 ASACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNGNNITRIHKNDFAGLKQLRVLQLMEN 95
Human 96 QIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQALSRLDLSENAIQAIPRKAFRGATDLK 160
Human 161 NLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAW 225
Human 226 LSQWLR----QRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSGQGEAGRVPTCTLSSGSCPAMC 286
Human 287 TCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPD 351
Human 352 AFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNK 416
Human 417 IQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETSGARCASPRRLANKRIGQIK 481
Human 482 SKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVECSSLKLTKIPERIPQSTAELR 546
Human 547 LNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRG 611
Human 612 LDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNLLANPFNCN 676
Human 677 CQLAWLGGWLRKRKIVTGN-PRCQNPDFLRQIPLQD--------VAFPDFRCEEGQEEGGCLPRP 732
Human 733 QCPQECACLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPG-QLSTFKYLQLVDLSNNKI 796
Human 797 SSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHL 861
Human 862 AIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQGPPTLAVQAKC 926
Human 927 DLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGPCENGGTCH-AQEGEDAPFT 990
Human 991 CSCPTGFEGPTCGVNTDDCVDHACANGGVCVDGVGNYTCQCPLQYEGKACEQLVDLCSPDLNPCQ 1055
Human 1056 HEAQCVGTPDGPRCECMPGYAGDNCSENQDDCRDHRCQNGAQCMDEVNSYSCLCAEGYSGQLCEI 1120
Human 1121 PPHLP---APKSPCEGTECQNGANCVDQGNRP--VCQCLPGFGGPECEKLLSVNFVDRDTYLQFT 1180
Human 1181 DLQNWPRANITLQVSTAEDNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQ 1245
Human 1246 FHTVELVAFDQMVNLSIDGGSPMTMDNFGKHYTL--NSEAPLYVGGMPVDVNSAAFRLWQILNGT 1308
Human 1309 GFHGCIRNLYINNELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPMCHCEAGWVGLHC 1373
Human 1374 DQPADGPCHGHKCVHGQCVPLDALSYSCQCQDGYSGALCNQAGALAEPCRGLQCLHGHC--QASG 1436
Human 1437 TKGAHCVCDPGFSGELC-EQESECRGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCPG-QGCCQ 1499
Human 1500 GLRLKRRKFTFECSDGTSFAEEVEKPTKCGC 1530 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SLIT1 | NP_003052.2 | LRRNT | 33..64 | CDD:214470 | 14/30 (47%) |
leucine-rich repeat | 43..62 | CDD:275380 | 9/18 (50%) | ||
LRR_8 | 61..121 | CDD:290566 | 27/59 (46%) | ||
LRR 1 | 62..83 | 11/20 (55%) | |||
leucine-rich repeat | 63..86 | CDD:275380 | 12/22 (55%) | ||
LRR_4 | 64..101 | CDD:289563 | 19/36 (53%) | ||
LRR 2 | 86..107 | 9/20 (45%) | |||
LRR_RI | <87..220 | CDD:238064 | 53/132 (40%) | ||
leucine-rich repeat | 87..110 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 109..169 | CDD:290566 | 27/59 (46%) | ||
LRR 3 | 110..131 | 9/20 (45%) | |||
leucine-rich repeat | 111..134 | CDD:275380 | 12/22 (55%) | ||
LRR 4 | 134..155 | 8/20 (40%) | |||
leucine-rich repeat | 135..158 | CDD:275380 | 9/22 (41%) | ||
LRR 5 | 158..179 | 9/20 (45%) | |||
LRR_8 | 159..217 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 159..182 | CDD:275380 | 9/22 (41%) | ||
LRR 6 | 182..203 | 11/20 (55%) | |||
leucine-rich repeat | 183..206 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 207..334 | CDD:275380 | 50/130 (38%) | ||
TPKR_C2 | 219..264 | CDD:301599 | 14/48 (29%) | ||
LRRNT | 282..313 | CDD:214470 | 16/30 (53%) | ||
LRR 7 | 310..331 | 12/20 (60%) | |||
LRR_8 | 312..369 | CDD:290566 | 33/56 (59%) | ||
LRR_4 | 334..373 | CDD:289563 | 24/38 (63%) | ||
LRR 8 | 334..355 | 12/20 (60%) | |||
leucine-rich repeat | 335..358 | CDD:275380 | 14/22 (64%) | ||
LRR 9 | 358..379 | 12/20 (60%) | |||
leucine-rich repeat | 359..379 | CDD:275380 | 12/19 (63%) | ||
LRR 10 | 382..403 | 13/20 (65%) | |||
leucine-rich repeat | 383..406 | CDD:275380 | 13/22 (59%) | ||
LRR_8 | 389..441 | CDD:290566 | 26/51 (51%) | ||
LRR 11 | 406..427 | 12/20 (60%) | |||
leucine-rich repeat | 407..428 | CDD:275380 | 12/20 (60%) | ||
leucine-rich repeat | 431..528 | CDD:275380 | 42/96 (44%) | ||
TPKR_C2 | 439..>469 | CDD:301599 | 19/29 (66%) | ||
LRRNT | 513..542 | CDD:214470 | 11/28 (39%) | ||
leucine-rich repeat | 529..566 | CDD:275380 | 11/36 (31%) | ||
LRR 12 | 541..562 | 5/20 (25%) | |||
LRR_RI | <544..627 | CDD:238064 | 26/82 (32%) | ||
LRR_8 | 544..601 | CDD:290566 | 19/56 (34%) | ||
LRR 13 | 566..587 | 8/20 (40%) | |||
leucine-rich repeat | 567..590 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 590..649 | CDD:290566 | 14/58 (24%) | ||
LRR 14 | 590..611 | 6/20 (30%) | |||
leucine-rich repeat | 591..614 | CDD:275380 | 6/22 (27%) | ||
LRR 15 | 614..635 | 6/20 (30%) | |||
LRR_4 | 615..654 | CDD:289563 | 9/38 (24%) | ||
leucine-rich repeat | 615..638 | CDD:275380 | 6/22 (27%) | ||
LRR 16 | 638..659 | 3/20 (15%) | |||
leucine-rich repeat | 639..660 | CDD:275380 | 3/20 (15%) | ||
leucine-rich repeat | 663..762 | CDD:275380 | 33/107 (31%) | ||
LRRCT | 671..719 | CDD:214507 | 15/56 (27%) | ||
LRRNT | 733..765 | CDD:214470 | 17/31 (55%) | ||
LRR_8 | 761..820 | CDD:290566 | 26/59 (44%) | ||
LRR 17 | 762..783 | 9/21 (43%) | |||
leucine-rich repeat | 763..785 | CDD:275380 | 9/22 (41%) | ||
LRR 18 | 785..806 | 9/20 (45%) | |||
LRR_4 | 786..827 | CDD:289563 | 20/40 (50%) | ||
leucine-rich repeat | 786..809 | CDD:275380 | 10/22 (45%) | ||
LRR 19 | 809..830 | 13/20 (65%) | |||
leucine-rich repeat | 810..830 | CDD:275380 | 13/19 (68%) | ||
LRR 20 | 833..854 | 13/20 (65%) | |||
leucine-rich repeat | 834..857 | CDD:275380 | 13/22 (59%) | ||
LRRCT | 866..915 | CDD:214507 | 22/48 (46%) | ||
EGF_CA | 927..962 | CDD:238011 | 14/34 (41%) | ||
EGF_CA | 966..1002 | CDD:238011 | 17/36 (47%) | ||
EGF_CA | 1005..1041 | CDD:238011 | 20/35 (57%) | ||
EGF_CA | 1044..1080 | CDD:238011 | 11/35 (31%) | ||
EGF_CA | 1085..1119 | CDD:238011 | 18/33 (55%) | ||
EGF_CA | <1136..1163 | CDD:238011 | 11/28 (39%) | ||
LamG | 1189..1322 | CDD:214598 | 45/134 (34%) | ||
slt-1 | NP_510437.2 | LRRNT | 17..47 | CDD:214470 | 14/29 (48%) |
leucine-rich repeat | 26..45 | CDD:275380 | 9/18 (50%) | ||
LRR_RI | <48..195 | CDD:238064 | 63/149 (42%) | ||
LRR_8 | 48..104 | CDD:290566 | 26/55 (47%) | ||
leucine-rich repeat | 48..69 | CDD:275380 | 11/20 (55%) | ||
leucine-rich repeat | 70..93 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 94..152 | CDD:290566 | 27/57 (47%) | ||
leucine-rich repeat | 94..117 | CDD:275380 | 12/22 (55%) | ||
leucine-rich repeat | 118..165 | CDD:275380 | 18/46 (39%) | ||
LRR_8 | 142..196 | CDD:290566 | 22/56 (39%) | ||
leucine-rich repeat | 142..163 | CDD:275380 | 9/20 (45%) | ||
leucine-rich repeat | 166..284 | CDD:275380 | 46/126 (37%) | ||
LRRCT | 195..243 | CDD:214507 | 15/52 (29%) | ||
LRRNT | 259..291 | CDD:214470 | 16/31 (52%) | ||
leucine-rich repeat | 285..312 | CDD:275380 | 14/26 (54%) | ||
LRR_8 | 287..347 | CDD:290566 | 33/59 (56%) | ||
LRR_4 | 311..352 | CDD:289563 | 25/40 (63%) | ||
leucine-rich repeat | 313..336 | CDD:275380 | 14/22 (64%) | ||
LRR_8 | 336..419 | CDD:290566 | 46/82 (56%) | ||
leucine-rich repeat | 337..384 | CDD:275380 | 27/46 (59%) | ||
leucine-rich repeat | 385..408 | CDD:275380 | 13/22 (59%) | ||
LRRCT | 417..466 | CDD:214507 | 25/48 (52%) | ||
LRRNT | 484..512 | CDD:214470 | 10/27 (37%) | ||
leucine-rich repeat | 494..516 | CDD:275380 | 7/21 (33%) | ||
LRR_RI | <514..635 | CDD:238064 | 35/144 (24%) | ||
leucine-rich repeat | 517..538 | CDD:275380 | 6/20 (30%) | ||
LRR_8 | 538..597 | CDD:290566 | 19/58 (33%) | ||
leucine-rich repeat | 539..562 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 563..586 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 587..610 | CDD:275380 | 8/35 (23%) | ||
leucine-rich repeat | 611..675 | CDD:275380 | 16/80 (20%) | ||
leucine-rich repeat | 676..729 | CDD:275380 | 26/52 (50%) | ||
LRRNT | 677..708 | CDD:214470 | 17/30 (57%) | ||
LRR_8 | 729..788 | CDD:290566 | 33/58 (57%) | ||
LRR_4 | 729..771 | CDD:289563 | 20/41 (49%) | ||
leucine-rich repeat | 730..753 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 754..777 | CDD:275380 | 15/22 (68%) | ||
leucine-rich repeat | 778..799 | CDD:275380 | 13/20 (65%) | ||
EGF_CA | 909..945 | CDD:238011 | 17/38 (45%) | ||
EGF_CA | 947..983 | CDD:238011 | 20/35 (57%) | ||
EGF_CA | <994..1023 | CDD:238011 | 10/28 (36%) | ||
EGF_CA | 1025..1061 | CDD:238011 | 19/35 (54%) | ||
LamG | 1133..1268 | CDD:214598 | 45/148 (30%) | ||
CT | 1334..1405 | CDD:214482 | 20/71 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 83 | 1.000 | Domainoid score | I5834 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4237 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 998 | 1.000 | Inparanoid score | I151 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45950 | |
OrthoDB | 1 | 1.010 | - | - | D20003at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001593 | |
OrthoInspector | 1 | 1.000 | - | - | otm15963 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103623 | |
Panther | 1 | 1.100 | - | - | O | PTHR45836 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3290 |
SonicParanoid | 1 | 1.000 | - | - | X1145 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.870 |