Sequence 1: | NP_003052.2 | Gene: | SLIT1 / 6585 | HGNCID: | 11085 | Length: | 1534 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001090702.1 | Gene: | slit1 / 100036682 | XenbaseID: | XB-GENE-1007728 | Length: | 1529 | Species: | Xenopus tropicalis |
Alignment Length: | 1528 | Identity: | 1265/1528 - (82%) |
---|---|---|---|
Similarity: | 1380/1528 - (90%) | Gaps: | 6/1528 - (0%) |
- Green bases have known domain annotations that are detailed below.
Human 8 GSSAGP--VRPELWLLLWAAAWRLGASACPALCTCTGTTVDCHGTGLQAIPKNIPRNTERLELNG 70
Human 71 NNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNNQAL 135
Human 136 SRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNNITTIPVSS 200
Human 201 FNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFTQCSGPASLRGLNVAEVQKSEFSCSG 265
Human 266 QGEAGRVPTCTLSSGSCPAMCTCSNGIVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFS 330
Human 331 PYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINC 395
Human 396 IRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIE 460
Human 461 TSGARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANVVE 525
Human 526 CSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAAS 590
Human 591 VSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPG 655
Human 656 AFDTLQSLSTLNLLANPFNCNCQLAWLGGWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE 720
Human 721 EGQEEGGCLPRPQCPQECACLDTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPGQLSTFKY 785
Human 786 LQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDISTLQEG 850
Human 851 IFADVTSLSHLAIGANPLYCDCHLRWLSSWVKTGYKEPGIARCAGPQDMEGKLLLTTPAKKFECQ 915
Human 916 GPPTLAVQAKCDLCLSSPCQNQGTCHNDPLEVYRCACPSGYKGRDCEVSLDSCSSGPCENGGTCH 980
Human 981 AQEGEDAPFTCSCPTGFEGPTCGVNTDDCVDHACANGGVCVDGVGNYTCQCPLQYEGKACEQLVD 1045
Human 1046 LCSPDLNPCQHEAQCVGTPDGPRCECMPGYAGDNCSENQDDCRDHRCQNGAQCMDEVNSYSCLCA 1110
Human 1111 EGYSGQLCEIPPHLPAPKSPCEGTECQNGANCVDQGNRPVCQCLPGFGGPECEKLLSVNFVDRDT 1175
Human 1176 YLQFTDLQNWPRANITLQVSTAEDNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAET 1240
Human 1241 INDGQFHTVELVAFDQMVNLSIDGGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQIL 1305
Human 1306 NGTGFHGCIRNLYINNELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPMCHCEAGWVG 1370
Human 1371 LHCDQPADGPCHGHKCVHGQCVPLDALSYSCQCQDGYSGALCNQAGALAEPCRGLQCLHGHCQAS 1435
Human 1436 GTKGAHCVCDPGFSGELCEQESECRGDPVRDFHQVQRGYAICQTTRPLSWVECRGSCPGQGCCQG 1500
Human 1501 LRLKRRKFTFECSDGTSFAEEVEKPTKCGCALC 1533 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SLIT1 | NP_003052.2 | LRRNT | 33..64 | CDD:214470 | 22/30 (73%) |
leucine-rich repeat | 43..62 | CDD:275380 | 13/18 (72%) | ||
LRR_8 | 61..121 | CDD:290566 | 53/59 (90%) | ||
LRR 1 | 62..83 | 17/20 (85%) | |||
leucine-rich repeat | 63..86 | CDD:275380 | 19/22 (86%) | ||
LRR_4 | 64..101 | CDD:289563 | 31/36 (86%) | ||
LRR 2 | 86..107 | 18/20 (90%) | |||
LRR_RI | <87..220 | CDD:238064 | 123/132 (93%) | ||
leucine-rich repeat | 87..110 | CDD:275380 | 20/22 (91%) | ||
LRR_8 | 109..169 | CDD:290566 | 55/59 (93%) | ||
LRR 3 | 110..131 | 19/20 (95%) | |||
leucine-rich repeat | 111..134 | CDD:275380 | 21/22 (95%) | ||
LRR 4 | 134..155 | 18/20 (90%) | |||
leucine-rich repeat | 135..158 | CDD:275380 | 20/22 (91%) | ||
LRR 5 | 158..179 | 18/20 (90%) | |||
LRR_8 | 159..217 | CDD:290566 | 55/57 (96%) | ||
leucine-rich repeat | 159..182 | CDD:275380 | 21/22 (95%) | ||
LRR 6 | 182..203 | 19/20 (95%) | |||
leucine-rich repeat | 183..206 | CDD:275380 | 21/22 (95%) | ||
leucine-rich repeat | 207..334 | CDD:275380 | 109/126 (87%) | ||
TPKR_C2 | 219..264 | CDD:301599 | 39/44 (89%) | ||
LRRNT | 282..313 | CDD:214470 | 30/30 (100%) | ||
LRR 7 | 310..331 | 19/20 (95%) | |||
LRR_8 | 312..369 | CDD:290566 | 53/56 (95%) | ||
LRR_4 | 334..373 | CDD:289563 | 37/38 (97%) | ||
LRR 8 | 334..355 | 19/20 (95%) | |||
leucine-rich repeat | 335..358 | CDD:275380 | 21/22 (95%) | ||
LRR 9 | 358..379 | 19/20 (95%) | |||
leucine-rich repeat | 359..379 | CDD:275380 | 18/19 (95%) | ||
LRR 10 | 382..403 | 17/20 (85%) | |||
leucine-rich repeat | 383..406 | CDD:275380 | 20/22 (91%) | ||
LRR_8 | 389..441 | CDD:290566 | 47/51 (92%) | ||
LRR 11 | 406..427 | 20/20 (100%) | |||
leucine-rich repeat | 407..428 | CDD:275380 | 19/20 (95%) | ||
leucine-rich repeat | 431..528 | CDD:275380 | 93/96 (97%) | ||
TPKR_C2 | 439..>469 | CDD:301599 | 29/29 (100%) | ||
LRRNT | 513..542 | CDD:214470 | 23/28 (82%) | ||
leucine-rich repeat | 529..566 | CDD:275380 | 31/36 (86%) | ||
LRR 12 | 541..562 | 17/20 (85%) | |||
LRR_RI | <544..627 | CDD:238064 | 71/82 (87%) | ||
LRR_8 | 544..601 | CDD:290566 | 49/56 (88%) | ||
LRR 13 | 566..587 | 18/20 (90%) | |||
leucine-rich repeat | 567..590 | CDD:275380 | 20/22 (91%) | ||
LRR_8 | 590..649 | CDD:290566 | 53/58 (91%) | ||
LRR 14 | 590..611 | 18/20 (90%) | |||
leucine-rich repeat | 591..614 | CDD:275380 | 20/22 (91%) | ||
LRR 15 | 614..635 | 18/20 (90%) | |||
LRR_4 | 615..654 | CDD:289563 | 34/38 (89%) | ||
leucine-rich repeat | 615..638 | CDD:275380 | 20/22 (91%) | ||
LRR 16 | 638..659 | 17/20 (85%) | |||
leucine-rich repeat | 639..660 | CDD:275380 | 17/20 (85%) | ||
leucine-rich repeat | 663..762 | CDD:275380 | 89/98 (91%) | ||
LRRCT | 671..719 | CDD:214507 | 46/47 (98%) | ||
LRRNT | 733..765 | CDD:214470 | 28/31 (90%) | ||
LRR_8 | 761..820 | CDD:290566 | 56/58 (97%) | ||
LRR 17 | 762..783 | 19/20 (95%) | |||
leucine-rich repeat | 763..785 | CDD:275380 | 19/21 (90%) | ||
LRR 18 | 785..806 | 20/20 (100%) | |||
LRR_4 | 786..827 | CDD:289563 | 39/40 (98%) | ||
leucine-rich repeat | 786..809 | CDD:275380 | 22/22 (100%) | ||
LRR 19 | 809..830 | 19/20 (95%) | |||
leucine-rich repeat | 810..830 | CDD:275380 | 18/19 (95%) | ||
LRR 20 | 833..854 | 17/20 (85%) | |||
leucine-rich repeat | 834..857 | CDD:275380 | 18/22 (82%) | ||
LRRCT | 866..915 | CDD:214507 | 42/48 (88%) | ||
EGF_CA | 927..962 | CDD:238011 | 18/34 (53%) | ||
EGF_CA | 966..1002 | CDD:238011 | 19/35 (54%) | ||
EGF_CA | 1005..1041 | CDD:238011 | 20/35 (57%) | ||
EGF_CA | 1044..1080 | CDD:238011 | 22/35 (63%) | ||
EGF_CA | 1085..1119 | CDD:238011 | 27/33 (82%) | ||
EGF_CA | <1136..1163 | CDD:238011 | 19/26 (73%) | ||
LamG | 1189..1322 | CDD:214598 | 125/132 (95%) | ||
slit1 | NP_001090702.1 | LRRNT | 32..63 | CDD:214470 | 22/30 (73%) |
leucine-rich repeat | 42..61 | CDD:275380 | 13/18 (72%) | ||
leucine-rich repeat | 62..85 | CDD:275380 | 19/22 (86%) | ||
LRR | <70..>218 | CDD:227223 | 136/147 (93%) | ||
leucine-rich repeat | 86..109 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 110..133 | CDD:275380 | 21/22 (95%) | ||
leucine-rich repeat | 134..157 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 158..181 | CDD:275380 | 21/22 (95%) | ||
leucine-rich repeat | 182..205 | CDD:275380 | 21/22 (95%) | ||
leucine-rich repeat | 206..310 | CDD:275380 | 87/103 (84%) | ||
TPKR_C2 | 214..263 | CDD:387596 | 42/48 (88%) | ||
LRRNT | 281..312 | CDD:214470 | 30/30 (100%) | ||
internalin_A | 310..>681 | CDD:380193 | 339/370 (92%) | ||
leucine-rich repeat | 312..333 | CDD:275380 | 19/20 (95%) | ||
leucine-rich repeat | 334..357 | CDD:275380 | 21/22 (95%) | ||
leucine-rich repeat | 358..378 | CDD:275380 | 18/19 (95%) | ||
leucine-rich repeat | 406..429 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 522..540 | CDD:275380 | 14/17 (82%) | ||
internalin_A | 531..>865 | CDD:380193 | 300/333 (90%) | ||
leucine-rich repeat | 541..565 | CDD:275380 | 19/23 (83%) | ||
leucine-rich repeat | 566..589 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 590..613 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 614..637 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 638..661 | CDD:275380 | 19/22 (86%) | ||
leucine-rich repeat | 662..784 | CDD:275380 | 110/121 (91%) | ||
leucine-rich repeat | 663..753 | CDD:275380 | 82/89 (92%) | ||
LRR_8 | 785..843 | CDD:338972 | 54/57 (95%) | ||
leucine-rich repeat | 785..808 | CDD:275380 | 22/22 (100%) | ||
leucine-rich repeat | 809..832 | CDD:275380 | 20/22 (91%) | ||
leucine-rich repeat | 833..853 | CDD:275380 | 16/19 (84%) | ||
PCC | 841..>978 | CDD:188093 | 101/136 (74%) | ||
EGF | 967..999 | CDD:333761 | 18/32 (56%) | ||
EGF_CA | 1003..1039 | CDD:238011 | 20/35 (57%) | ||
EGF_CA | 1042..1078 | CDD:238011 | 22/35 (63%) | ||
EGF_CA | 1083..1117 | CDD:238011 | 27/33 (82%) | ||
EGF | 1126..1155 | CDD:333761 | 20/28 (71%) | ||
LamG | 1184..1317 | CDD:214598 | 125/132 (95%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 274 | 1.000 | Domainoid score | I10495 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2302 | |
Inparanoid | 1 | 1.050 | 2701 | 1.000 | Inparanoid score | I322 |
NCBI | 1 | 1.000 | - | - | ||
OMA | 1 | 1.010 | - | - | QHG45950 | |
OrthoDB | 1 | 1.010 | - | - | D13455at32523 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001593 | |
OrthoInspector | 1 | 1.000 | - | - | oto154953 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45836 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3290 |
SonicParanoid | 1 | 1.000 | - | - | X1145 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 14.110 |