DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A4 and SLC22A

DIOPT Version :9

Sequence 1:NP_003050.2 Gene:SLC22A4 / 6583 HGNCID:10968 Length:551 Species:Homo sapiens
Sequence 2:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster


Alignment Length:553 Identity:152/553 - (27%)
Similarity:277/553 - (50%) Gaps:44/553 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     5 DEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCRVPD----AANLSSAWRNN 65
            |.::..||::|.||.:||.|:...::.:....::.||.|.|..|||.|.:    .:|......|.
  Fly    28 DAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRCSVEECDLPGSNYYEPHTNW 92

Human    66 SVPLRLRDGREVPHSCSRYRLATIANFSALGLEPGRDVDLGQLE-----QESCL-DGWEFSQDVY 124
            |:|   ::|::: .||:||..:.:..::       ..||:...:     :|:|. :.:.|..|..
  Fly    93 SIP---KNGKDL-DSCNRYTNSELPQWN-------HSVDICSADHFTKNKEACAHNEFVFRDDEV 146

Human   125 LSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVSGQLSDRFGRK------NVLFATMAVQTGF 183
              |:..::.:.|:|.||:.:..::..:|...|..:.|.::||:||.      .:|.|.:.|    
  Fly   147 --TISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGILGAVLGV---- 205

Human   184 SFLQIFSISWEMFTVLFVIVGMGQISNYVVAFILGTEILGKSVRIIFSTLGVCTFFAVGYMLLPL 248
              ::.||.|:..|.|...:..|...:.|...|::|.|::|...|::..:: :..|:|||.:||.:
  Fly   206 --IRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSV-ITVFYAVGEVLLAM 267

Human   249 FAYFIRDWRMLLLALTVPGVLCVPLWWFIPESPRWLISQRRFREAEDIIQKAAKMNNIAVPAVIF 313
            .|....|||:||.....|.::.:..:|.:|||.|||:||.:...|::|:::||.:|...:|..:.
  Fly   268 SAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNKRELPESVL 332

Human   314 DSV-----EELNPLKQQKAFILDLFRTRNIAIMTIMSLLLWMLTSVGYFALSLDAPNLHGDAYLN 373
            |.:     ::|....:.:..|.:.|  :|.........|.|::..:.|:.|||:...|.||.|.|
  Fly   333 DKLVLANRDKLQQSSESRFPIREAF--KNFKWRIANCSLCWIVHVLVYYGLSLNVVLLDGDKYNN 395

Human   374 CFLSALIEIPAYITAWLLLRTLPRRYIIAAVLFWGGGVLLFIQLVPVDYYFLSIGLVMLGKFGIT 438
            ....||:|||.:....|::....|||.:..::...|...:.......|...|.:.|.::||..||
  Fly   396 FAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLFLVGKLTIT 460

Human   439 SAFSMLYVFTAELYPTLVRNMAVGVTSTASRVGSIIAPYFVYLGAYNRMLPYIVMGSLTVLIGIL 503
            ::|.:||.|.:|:|||.:||..:...|...|.||::||....|..|....|.::.....::.|:|
  Fly   461 ASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLAKYYANAPAMLFAGAAIVSGLL 525

Human   504 TLFFPESLGMTLPETLEQMQKVKWFRSGKKTRD 536
            ||||||:..:.||.|:::...: ..:...|::|
  Fly   526 TLFFPETTNVVLPTTVQEADAI-GVKKQSKSKD 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22A4NP_003050.2 2A0119 12..518 CDD:273328 147/526 (28%)
MFS 123..508 CDD:119392 112/395 (28%)
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 147/526 (28%)
MFS 146..530 CDD:119392 112/394 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
54.980

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