DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A4 and CG3168

DIOPT Version :10

Sequence 1:NP_003050.2 Gene:SLC22A4 / 6583 HGNCID:10968 Length:551 Species:Homo sapiens
Sequence 2:NP_572345.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster


Alignment Length:474 Identity:105/474 - (22%)
Similarity:184/474 - (38%) Gaps:113/474 - (23%)


- Green bases have known domain annotations that are detailed below.


Human   122 DVYLSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVSGQLSDRFGRKNVLF-----------A 175
            |:.|:|....|            ..|:.|:|:::|::..|.::|.||||.||.           |
  Fly   181 DLDLNTETKGW------------LNSIIFIGMMVGAYFWGSIADSFGRKKVLIVISFMNAFCIVA 233

Human   176 TMAVQTGFSFLQIF------------SISWEMFTVLFVIVGMGQISNYVVAFILGTEILGKSVR- 227
            :...|| :||..:|            .:.|..|.........|.:.:::.||.....:...|:. 
  Fly   234 SSFSQT-YSFFMLFRFLNGAALGGSGPVIWSYFAEFQPKAKRGSMLSFMAAFWTFGNLFVASLAW 297

Human   228 -IIFSTLGVCTFFAVGYMLLPLFAYFIRDWRMLLLALTVPGVLCVPLWWFIPESPRWLISQRRFR 291
             ||..|:|..|         |.|.|  ..||:.||..::|..|...|.:::||||::|:::.:..
  Fly   298 LIIPRTIGFTT---------PYFTY--NSWRIFLLVCSLPSFLVGFLLFYLPESPKFLLTRGKKD 351

Human   292 EAEDIIQKAAKMNNIAVP--AVIFD-SVEE---------LNPLKQQKAFILD----LFRTRNIAI 340
            .|..|.:.....|....|  .:::| .|:|         .|...:..:.::|    ||:: .|..
  Fly   352 RALAIFRGIFVTNTKRRPDEYMVYDLEVDEKLLESNGNVKNKYSRMISGMVDHSRALFKS-PILR 415

Human   341 MTIMSLLLWMLTSVGYFALSLDAPNL--------------------------------------H 367
            .||:|:.:.....:||:.|.:..|.|                                      .
  Fly   416 FTIVSITINFTFHIGYYGLLMWFPELFNRFEEYEKAFPDQSAGVCAVTDYVVNLAKEQSNNGTCS 480

Human   368 GDAYLNCFLSALIE----IPAYITAWLLLRTLPRRYIIAAVLFWGGGVLLFIQLVPVDYYFLSIG 428
            .|...:.|:.:||.    :||.:.|.|.:..|.|::.:.|.....|.....:..|......|.:.
  Fly   481 SDIPQSVFMESLISLASALPANLLAILGMDMLGRKFFLIAGTMTAGICSALMYFVRSSVQNLVVS 545

Human   429 LVMLGKFGITSAFSMLYVFTAELYPTLVRNMAVGVTSTASRVGSIIAPYFV--YLGAYNRMLPYI 491
            .:..|  .|::|.:.|.....|::||.:|...|.::..|:|:|.||....:  .|..|.....:|
  Fly   546 AIFSG--AISAANAALDCLITEVFPTKLRATGVAISMVAARLGGIIGNIVIAQLLDNYCPSPTFI 608

Human   492 VMGSLTVLIGILTLFFPES 510
            |.| |.:..|::.|..|.:
  Fly   609 VSG-LLIGGGLMCLLLPNT 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22A4NP_003050.2 2A0119 12..518 CDD:273328 105/474 (22%)
CG3168NP_572345.1 synapt_SV2 <137..626 CDD:130366 105/472 (22%)

Return to query results.
Submit another query.