DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A1 and Orct

DIOPT Version :9

Sequence 1:XP_005267159.1 Gene:SLC22A1 / 6580 HGNCID:10963 Length:610 Species:Homo sapiens
Sequence 2:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster


Alignment Length:509 Identity:172/509 - (33%)
Similarity:267/509 - (52%) Gaps:39/509 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     5 DDILEQVGESGWFQKQAFLILCLLSAAFAPICVGIVFLGFTPDHHCQSP----GVAELSQRCGWS 65
            ||::..:||.|.:||:.:.:|||.:...|...:..|||...||..|..|    .:.|||... |:
  Fly     4 DDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELSPHL-WN 67

Human    66 PAEELNYTVPGLGPAGEAFLGQCRRYEVDWNQSALSCVDPLASLATNRSHLPLGPCQDGWVYDTP 130
                |:|      |..|    :|..|:||:.:..|:...|.:|..|.       .| ..:|||..
  Fly    68 ----LSY------PENE----RCSYYDVDYTEEYLNGSIPRSSNETK-------TC-SSYVYDRS 110

Human   131 G--SSIVTEFNLVCADSWKLDLFQSCLNAGFLFGSLGVGYFADRFGRKLCLLGTVLVNAVSGVLM 193
            .  :|.|||:||||:.|.......|....|.|.|||..|..:|:.|||.....::::..:.|||.
  Fly   111 KYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFASLVLQLIFGVLA 175

Human   194 AFSPNYMSMLLFRLLQGLVSKGNWMAGYTLITEFVGSGSRRTVAIMYQMAFTVGLVALTGLAYAL 258
            |.:|.|.|..:.|::.|..:.|.::..|.:..|.|||..|....:..||.|:||.:...|.||.:
  Fly   176 AVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVGFMLTAGFAYFI 240

Human   259 PHWRWLQLAVSLPTFLFLLYYWCVPESPRWLLSQKRNTEAIKIMDHIAQKNGKLPPADLKMLSLE 323
            ..|||||:|::||..|||.|||.:|||.||||.:.|..||..|::..|::|....|.::....::
  Fly   241 HDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVEVPNEIYEQLVD 305

Human   324 EDVTEKLSPSFA---------DLFRTPRLRKRTFILMYLWFTDSVLYQGLILHMGATSGNLYLDF 379
            |...:|.....|         ||.|.|.||::|.::.:.||.:|.:|.||..:.....||..::|
  Fly   306 EVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNTNNLGGNQLVNF 370

Human   380 LYSALVEIPGAFIALITIDRVGRIYPMAMSNLLAGAACLVMIFISPDLHWLNIIIMCVGRMGITI 444
            :.|..|||||..:.|.|::|.||...:..:.::||.:.|..||:..|::||.:....:|::.||.
  Fly   371 MISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVACAMIGKLAITS 435

Human   445 AIQMICLVNAELYPTFVRNLGVMVCSSLCDIGGIITPFIVFRLREVWQALPLIL 498
            :...|.:.:||.:||.|||:|:...|.:..:|||:.|::.. |.|:|:.||||:
  Fly   436 SYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKL-LGEIWRPLPLII 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22A1XP_005267159.1 2A0119 12..499 CDD:273328 170/502 (34%)
MFS 118..484 CDD:119392 131/376 (35%)
OrctNP_001262908.1 2A0119 11..514 CDD:273328 170/502 (34%)
MFS 135..491 CDD:119392 125/355 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153488
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.950

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