DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A1 and SLC22A

DIOPT Version :9

Sequence 1:XP_005267159.1 Gene:SLC22A1 / 6580 HGNCID:10963 Length:610 Species:Homo sapiens
Sequence 2:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster


Alignment Length:567 Identity:166/567 - (29%)
Similarity:250/567 - (44%) Gaps:60/567 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     3 TVDDILEQVGESGWFQKQAFLILCLLSAAFAPICVGIVFLGFTPDH-----HCQSPGVAELSQRC 62
            |:|.||:.:|:.|.||...||::||.....|...|..||...|..|     .|..||........
  Fly    26 TLDAILKHLGQFGRFQLIIFLLICLPMMFHAMFSVTYVFTAATVTHRCSVEECDLPGSNYYEPHT 90

Human    63 GWSPAEELNYTVPGLGPAGEAFLGQCRRYE----VDWNQSALSC-VDPLASLATNRSHLPLGPCQ 122
            .||        :|..|..    |..|.||.    ..||.|...| .|.........:|       
  Fly    91 NWS--------IPKNGKD----LDSCNRYTNSELPQWNHSVDICSADHFTKNKEACAH------- 136

Human   123 DGWVYDTPGSSIVTEFNLVCADSWKLDLFQSCLNAGFLFGSLGVGYFADRFGRKLCL-LGTVLVN 186
            :.:|:.....:|..:|.:.|.|.|||.:..:..|.|..||....|:.|||:||...: ||.:| .
  Fly   137 NEFVFRDDEVTISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIGGFVADRYGRSFSIALGGIL-G 200

Human   187 AVSGVLMAFSPNYMSMLLFRLLQGLVSKGNWMAGYTLITEFVGSGSRRTVAIMYQMAFTVGLVAL 251
            ||.||:.:|||:|...|:|..|..:.|...:...:.:..|.||...|.....:..:.:.||.|.|
  Fly   201 AVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSVITVFYAVGEVLL 265

Human   252 TGLAYALPHWRWLQLAVSLPTFLFLLYYWCVPESPRWLLSQKRNTEAIKIMDHIAQKNGK-LPPA 315
            ...|.|...||.|......|:.:.|.|:|.:|||.||||||.:...|..|:...|..|.: ||.:
  Fly   266 AMSAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNKRELPES 330

Human   316 DL-KMLSLEEDVTEKLSPS---FADLFRTPRLRKRTFILMYLWFTDSVLYQGLILHMGATSGNLY 376
            .| |::....|..::.|.|   ..:.|:..:.|.....|  .|....::|.||.|::....|:.|
  Fly   331 VLDKLVLANRDKLQQSSESRFPIREAFKNFKWRIANCSL--CWIVHVLVYYGLSLNVVLLDGDKY 393

Human   377 LDFLYSALVEIPGAFIALITIDRVGRIYPMAMSNLLAGAACLVMIFISPDLHWLNIIIMCVGRMG 441
            .:|.|.|||||||.|:.|:.:||.||.|.:....|.:|..|:..||...|...|.:::..||::.
  Fly   394 NNFAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPVLQLVLFLVGKLT 458

Human   442 ITIAIQMICLVNAELYPTFVRNLGVMVCSSLCDIGGIITPFIVFRLREVWQALPLILFEKQS--- 503
            ||.:.|::....:|:|||.:||..:..||.:...|.::.|.... |.:.:...|.:||...:   
  Fly   459 ITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPL-LAKYYANAPAMLFAGAAIVS 522

Human   504 -------PKKTRFTLRSKPQNPRAPERDVLRRCRVGGMKMELSSAEI 543
                   |:.|...|.:..|     |.|.:      |:|.:..|.::
  Fly   523 GLLTLFFPETTNVVLPTTVQ-----EADAI------GVKKQSKSKDL 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22A1XP_005267159.1 2A0119 12..499 CDD:273328 151/502 (30%)
MFS 118..484 CDD:119392 118/371 (32%)
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 156/527 (30%)
MFS 146..530 CDD:119392 121/387 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153733
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.960

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