DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC22A1 and CarT

DIOPT Version :9

Sequence 1:XP_005267159.1 Gene:SLC22A1 / 6580 HGNCID:10963 Length:610 Species:Homo sapiens
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:520 Identity:159/520 - (30%)
Similarity:254/520 - (48%) Gaps:45/520 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     4 VDDILEQVGESGWFQKQAFLILCLLSAAFAPICVGIVFLGF-------TPDHH-CQSPGVAE--L 58
            :||:|..:||.|.:||.....:||      |.|:...|..|       |||.: |:.|.:.:  |
  Fly    36 LDDLLPTIGEFGKYQKLLVFGICL------PACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPL 94

Human    59 SQRCGWSPAEELNYTVPGLGPAGEAFLGQCRRYEVDWNQSALSC-VDPLASLATNRSHLPLGPCQ 122
            .||...|..:||:        ..|....:|..|.|:|.|...|. .|.|.::..|.| .||..|.
  Fly    95 EQRKSLSIPKELD--------NDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNAS-WPLIKCP 150

Human   123 DGWVYDTP--GSSIVTEFNLVCADSWKLDLFQSCLNAGFLFGSLGV---GYFADRFGRKLCLLGT 182
            .||.|:|.  .||||.:|:|||.......:..:.||.|   |.:||   |...||.||:|... .
  Fly   151 QGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTG---GPVGVYLFGLLNDRGGRRLSYF-V 211

Human   183 VLVNAVSGVLM-AFSPNYMSMLLFRLLQGLVSKGNWMAGYTLITEFVGSGSRRTVAIMYQMAFTV 246
            .|...::|.|| :.|.::.:....|::.||.....:...:.:..|.||...|..|.:|....:|.
  Fly   212 CLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTS 276

Human   247 GLVALTGLAYALPHWRWLQLAVSLPTFLFLLYYWCVPESPRWLLSQKRNTEAIKIMDHIAQKNGK 311
            |::.|:|:.|....|..|....|||.:.:.||.:.:||||||||.:.|..||:||::.:|:.||:
  Fly   277 GIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGR 341

Human   312 LPP--------ADLKMLSLEEDVTEKLSPSFADLFRTPRLRKRTFILMYLWFTDSVLYQGLILHM 368
            ..|        |.::...|::...:..:...|||.|||.:|.:|.::...||.:..:|.||..:.
  Fly   342 EFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYG 406

Human   369 GATSGNLYLDFLYSALVEIPGAFIALITIDRVGRIYPMAMSNLLAGAACLVMIFISPDLHWLNII 433
            .|...|.|:.|..||:||:|........:|..||.:|:::|.:|.|.||::.:.:..|.....::
  Fly   407 PALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLV 471

Human   434 IMCVGRMGITIAIQMICLVNAELYPTFVRNLGVMVCSSLCDIGGIITPFIVFRLREVWQALPLIL 498
            :..|.:..::.:..:|.....|||||.||.:|:...|.:..:|.|..|||.:..::..: |||::
  Fly   472 LYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLK-LPLVI 535

Human   499  498
              Fly   536  535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC22A1XP_005267159.1 2A0119 12..499 CDD:273328 156/512 (30%)
MFS 118..484 CDD:119392 118/379 (31%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 156/512 (30%)
MFS 182..551 CDD:119392 108/359 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
66.020

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