DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC16A2 and kar

DIOPT Version :9

Sequence 1:NP_006508.2 Gene:SLC16A2 / 6567 HGNCID:10923 Length:539 Species:Homo sapiens
Sequence 2:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster


Alignment Length:443 Identity:167/443 - (37%)
Similarity:272/443 - (61%) Gaps:21/443 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    91 GFQPPEGGF-GWVVVFAATWCNGSIFGIHNSVGILYSMLLEE-EKEKNRQVEFQAAWVGALAMGM 153
            |.:||:||. .|:|:.:|..|||.|||..|:.|:::|:|.:. .|..:.:...:||.:||||:|.
  Fly    70 GKEPPDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGT 134

Human   154 IFFCSPIVSIFTDRLGCRITATAGAAVAFIGLHTSSF-TSSLSLRYFTYGILFGCGCSFAFQPSL 217
            .|..|.:....||::|.|:|..||..::..||..||| |.::...||||||:||.|.:.|:.|:|
  Fly   135 TFLFSTMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTL 199

Human   218 VILGHYFQRRLGLANGVVSAGSSIFSMSFPFLIRMLGDKIKLAQTFQVLSTFMFVLMLLSLTYRP 282
            .||||||:|.||..:|.|:||||:|::..|..:..|.....|..|.:::|.....::|.|..|:|
  Fly   200 AILGHYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKP 264

Human   283 LLPSSQDTPSKRGVRTLHQRFLAQLRKYFNMRVFRQRTYRIWAFGIAAAALGYFVPYVHLMKYVE 347
            |.|..:....|.|    ..|....||...|:.:::::.:.|||..:..|..||||||||:|::|:
  Fly   265 LHPPPEPPKKKPG----RSRINLFLRSIINVEIWKRKRFVIWALCVPLALFGYFVPYVHMMQFVK 325

Human   348 EEFSEIKETWVLLVCIGATSGLGRLVSGHISDSIPGLKKIYLQVLSFLLLGLMSMMIPLCRDFGG 412
            ..|.. ::..:.::|||.|||:|||:.|.|:| :||:.::|||.||.:.:||:::::||...:..
  Fly   326 TTFPG-EDVNLPVMCIGITSGIGRLIFGVIAD-MPGVNRMYLQQLSLVSIGLVTLLLPLTNSYVI 388

Human   413 LIVVCLFLGLCDGFFITIMAPIAFELVGPMQASQAIGYLLGMMALPMIAGPPIAGLLRNCFGDYH 477
            |:...|.:||.||.||:::.|||:|:.||..|:||||:|||:.::|:..|||:||::.:....|.
  Fly   389 LVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTVGPPVAGMIFDSTNSYT 453

Human   478 VAFYFAGVPPIIGAVILFFVPLMHQRMFKKEQRDSSKDK--MLAPDPDPNGEL 528
            :....||:||::|:.:||.:     :..|:|:...|..:  :||     ||::
  Fly   454 LPLILAGLPPLLGSSLLFLI-----KCVKEEENGVSAPRAVVLA-----NGDI 496

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity