DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC12A4 and CG10413

DIOPT Version :9

Sequence 1:NP_001139434.1 Gene:SLC12A4 / 6560 HGNCID:10913 Length:1087 Species:Homo sapiens
Sequence 2:NP_001286048.1 Gene:CG10413 / 35111 FlyBaseID:FBgn0032689 Length:941 Species:Drosophila melanogaster


Alignment Length:1121 Identity:288/1121 - (25%)
Similarity:458/1121 - (40%) Gaps:285/1121 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    69 MTRTEELDIRPKVSSLLGK----LVSYTNLTQGAKEHEE----AESGEGTRRRAAEAP-----SM 120
            |:.:.|.:..|..:|..|:    ..|:.:|..|::...:    .:.|:|......:.|     ::
  Fly     1 MSASAEQETAPIANSRSGRTGSVFRSFGSLFGGSQNSGDRPHTPQDGDGYVEFGMQDPDRSGRTL 65

Human   121 GTLMGVYLPCLQNIFGVILFLRLTWMVGTAGVLQALLIVLICCCCTLLTAISMSAIATNGVVPAG 185
            ||..||:.|...::|..::|:|:.::||.||:...||..||.....|.|..|:.||:|||.:..|
  Fly    66 GTFAGVFSPVALSMFSALVFIRVGYIVGNAGLYVTLLQFLIAYGILLFTVASVCAISTNGAIEGG 130

Human   186 GSYFMISRSLGPEFGGAVGLCFYLGTTFAAAMYILGAIEILLTYIAPPAAIFYPSGAH------- 243
            |.||||||:||.||||::|..|:......:||.|.|..|.::.... |...|....:|       
  Fly   131 GVYFMISRTLGLEFGGSIGTLFFFANVVGSAMAISGCTEGIMDNFG-PRGHFVSGDSHLPDGDWW 194

Human   244 -DTSNATLNNMRVYGTIFLTFMTLVVFVGVKYVNKFASLFLACVIISILSIYAGGIKSIFDPPVF 307
             ..:::.:|          |...||..||.....|.:.:.||.|.:.:.:.|            |
  Fly   195 RFLTSSMIN----------TLQLLVCLVGAALFAKTSVIILATVTVCLFATY------------F 237

Human   308 PVCMLGNRTLSRDQFDICAKTAVVDNETVATQLWSFFCHSPNLTTDSCDPYFMLNNVTEIPGIPG 372
            ....:|                 ..|.|:.            :..|:     :|:|.|......|
  Fly   238 SFLFVG-----------------ATNNTIP------------VPGDN-----ILSNTTTFLDYTG 268

Human   373 AAAGVLQENLWSAYLEKGDIVEKHGLPSADAPSLKESLPLYVVADIATSFTVLVGIFFPSVTGIM 437
            ..|..|::||.|.|   |.....:|         |:       .|.:|:|    |:.|..|||||
  Fly   269 LNATTLRDNLGSHY---GRDYTSNG---------KQ-------VDFSTTF----GVLFSGVTGIM 310

Human   438 AGSNRSGDLRDAQKSIPVGTILAIITTSLVYFSSVVLFGACIEGVVLRDKYGDGVSRNLVVGTLA 502
            ||:|.||:|::..||||.||:.|:..|.:.|.....|.........:::.|...:..||      
  Fly   311 AGANMSGELKNPSKSIPYGTLSAVAFTFVSYIILSFLMSCTTPYFTMQNNYLFLMPVNL------ 369

Human   503 WPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVFG-------HGKVNGEPTWAL 560
            || |:. .||...:|....|.:|.|:.|:|:|::||      :|||       ||...|.|..|:
  Fly   370 WP-PFT-AIGILTATFSTSLSNLIGSSRILEALSKD------QVFGSLLNFVIHGTWKGNPIAAV 426

Human   561 LLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGM 625
            .::..:.|..:||.|.:::|.|.|:.|::.||..||||....|...||:||.||::.|....:|:
  Fly   427 AVSWCLVECILLIGSFNIIAQINSVLFMLSYLATNLACLGIELTGAPNFRPLFKFFTWHTCLVGL 491

Human   626 SLCLALMFVSSWYYA---LVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPP 687
            ...|.:|||.::.||   ::..||..:............:||...:.|.....|..||.|:....
  Fly   492 LGTLIMMFVINFIYASSCIILCLILVIALHLFSPATQAAQWGSISQALMFHQVRKYLLMLDPRKD 556

Human   688 HTKNWRPQLLVLLKLDEDLHVKYPR----LLTFASQLKAGKGLTIVGSVIQGSFLESYGEAQAAE 748
            |.|.||||:|:|        |..||    |:.|.:.||. .||.|:|.|..|.| :...:|:..:
  Fly   557 HVKFWRPQILLL--------VSSPRSCCPLVDFVNDLKK-SGLYIIGHVKLGDF-KGIEDAEDNQ 611

Human   749 QTIKNMMEIEKVKGFCQVVVASKVREGLAHLIQSCGLGGMRHNSVVLGW---------------P 798
            |. .:.::..:||.|.:|.::..:|||:.|||:..|:|.|:.|:::||:               |
  Fly   612 QW-WSFLDHMRVKAFTEVTLSRSIREGVQHLIRLSGIGAMKPNTIILGFYDSEAPRDFFQNGSSP 675

Human   799 YGW-------------RQSEDPRAW------KTFIDTVR-------CTTAAHLALLVPKNIAFYP 837
            |..             |:..||:.:      :...||:|       |.....|    .||. ...
  Fly   676 YKTDDFNNGEIQNFPIRRDGDPKQFQIQEYVQILCDTLRMKKNLCLCRNFQRL----DKNF-ISM 735

Human   838 SNHERYLEGHIDVWWI----VHDGGMLMLLPFLLRQHKV-----WRKCRMRIF--------TVAQ 885
            |.|.:|    ||||.|    ...|....::...:.|..|     |:..|:|||        ||..
  Fly   736 SKHVKY----IDVWPINIFNPTSGDPFDMVSLFMMQLAVIMLAKWKHLRVRIFLCEANDERTVGT 796

Human   886 MDDNSIQM----KKDLAVFLYHLRLEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKT 946
            .|..:.||    |..|...|..||:.|::..::..:.|.....:.|||                 
  Fly   797 FDTQTPQMEIFSKMKLEQSLKELRITADIVEIQEWSRDTDFSRHARTL----------------- 844

Human   947 EREREAQLVKDRHSALRLESLYSDEEDESAVGADKIQMTWTRDKYMTETWDPSHAPDNFRELVHI 1011
                       :....:.:::..:::||  ||.:.:.                      |.|:::
  Fly   845 -----------KQFTAQADNVVLEDDDE--VGEETLN----------------------RSLLYM 874

Human  1012 KPDQSNVRRMHTAVKLNEVIVTRSHDARLVLLNMPGPPRNSEGD-----ENYMEFLEVLTEGLER 1071
            :             :.|::|..||....|..:.:..||:.|..|     .:|||.|..||..|..
  Fly   875 Q-------------RANQIIRERSDQTALSFIYLAAPPKLSAPDFAQRSASYMELLTELTADLPP 926

Human  1072 VLLVRGGGREVITIYS 1087
            .:||.|    |.|:.|
  Fly   927 TILVHG----VSTVTS 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC12A4NP_001139434.1 2a30 70..1087 CDD:273347 286/1118 (26%)
SLC5-6-like_sbd 144..>305 CDD:294310 51/168 (30%)
SLC12 711..1087 CDD:281515 101/446 (23%)
CG10413NP_001286048.1 2a30 22..932 CDD:273347 279/1088 (26%)
SLC12 577..932 CDD:281515 96/431 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158233
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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