DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC12A2 and NKCC

DIOPT Version :10

Sequence 1:NP_001037.1 Gene:SLC12A2 / 6558 HGNCID:10911 Length:1212 Species:Homo sapiens
Sequence 2:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster


Alignment Length:1151 Identity:457/1151 - (39%)
Similarity:664/1151 - (57%) Gaps:162/1151 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   138 RFRVNFVDPAASS-------SAEDSLSDAAGVGVDGPNVSFQNGGDTVLSEGSSLHSGGGGGSGH 195
            ||:::.|:..|::       |||...:|||.   ..|..|.:|          .||....|.:|.
  Fly     4 RFQISKVNGTANAGYDGEARSAESDQTDAAH---PLPPTSNEN----------HLHPKASGETGE 55

Human   196 HQHYYYDTHTNTYYLRTFGH---------------NTMDAVPRIDHYRHTAAQLGEKLLRPSLAE 245
            ::      .::....|.||:               .|.:::||:|:||.:.    ..|.|||:.|
  Fly    56 NR------RSSRLSFRGFGNFLRKSDAERKFSLAQLTKESLPRLDNYRISM----RNLKRPSIGE 110

Human   246 LHDEL--------EKEPFEDGFANGEESTPTRDAVVTYTAESKGVVKFGWIKGVLVRCMLNIWGV 302
            |..|.        |.||...|                      |.:|.|||.|||:.|:||||||
  Fly   111 LQGEAVDQSITIPEPEPEATG----------------------GHIKLGWIVGVLIPCLLNIWGV 153

Human   303 MLFIRLSWIVGQAGIGLSVLVIMMATVVTTITGLSTSAIATNGFVRGGGAYYLISRSLGPEFGGA 367
            |||:||||:|.::||..|:::|.::.||..||.||.|||:|||.|:|||.|::||||||||||.:
  Fly   154 MLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLGPEFGAS 218

Human   368 IGLIFAFANAVAVAMYVVGFAETVVELLKEHSILMIDE-INDIRIIGAITVVILLGISVAGMEWE 431
            :|::|||||||:.:|..:||.|::..|||.:.:.::|. ||||||:|:|||::|:.|...|||||
  Fly   219 VGVVFAFANAVSASMNTIGFCESLNVLLKNNDLKIVDNGINDIRIVGSITVLVLILICCVGMEWE 283

Human   432 AKAQIVLLVILLLAIGDFVIGTFI-PL--ESKKPKGFFGYKSEIFNENFGPDFREEE----TFFS 489
            .|||..|:|.::|||.:|:||..| |.  |.:..:||.|:......||||.|:|..|    .|||
  Fly   284 TKAQNFLIVTIVLAIFNFLIGAAIGPQGNEEQISRGFVGFSWATLKENFGSDYRYAEGVNHDFFS 348

Human   490 VFAIFFPAATGILAGANISGDLADPQSAIPKGTLLAILITTLVYVGIAVSVGSCVVRDATG---- 550
            |||||||:.|||.|||||.|||.|..:||||||..::||:...|....:..|...||||:|    
  Fly   349 VFAIFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFVLFAGGAAVRDASGIPAD 413

Human   551 NVNDTIVTELTNCTSAACKLNFDFSSCESSPCSYGLMNNFQVMSMVSGFTPLISAGIFSATLSSA 615
            .||.|||:....|.:             :..|::||.|::::|..:|.:.|||.||.|:||||:|
  Fly   414 LVNGTIVSSELPCMA-------------TGNCTWGLFNSYEMMQEMSLWGPLIYAGCFAATLSTA 465

Human   616 LASLVSAPKIFQALCKDNIYPAFQMFAKGYGKNNEPLRGYILTFLIALGFILIAELNVIAPIISN 680
            |.:|:|.|::.|||..|.|||....|:|.|||:.||.|||:|||.|..||:||.|||:|||:||.
  Fly   466 LTNLLSVPRLVQALGIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELNLIAPLIST 530

Human   681 FFLASYALINFSVFHASLAKSPGWRPAFKYYNMWISLLGAILCCIVMFVINWWAALLTYVIVLGL 745
            |:|||||||||..|||:..|..||||.|||||.|:||.|..:|..:||:||:.||::|:.|:..|
  Fly   531 FYLASYALINFCTFHAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAIITFGIIFAL 595

Human   746 YIYVTYKKPDVNWGSSTQALTYLNALQHSIRLSGVEDHVKNFRPQCLVMTGAPNSRPALLHLVHD 810
            |:.|.|:||:.||||:|||..|..||....||..|.|||||:.||.||::|.|.:||.|:...:.
  Fly   596 YLVVMYRKPEANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLSGDPKTRPPLVDFGYL 660

Human   811 FTKNVGLMICGHVHMGPRRQAMKEMSIDQAKYQRWLIKNKMKAFYAPVHADDLREGAQYLMQAAG 875
            .|||..||...::.  |.|...|.........|::|...|:||||..:....|.:|...|.::.|
  Fly   661 LTKNNSLMFVANII--PVRVGYKNRQHLVKDGQKYLDARKIKAFYNVIDGFSLEDGINALTKSTG 723

Human   876 LGRMKPNTLVLGFKKDWLQADMRDVDMYINLFHDAFDIQYGVVVIRLKEGLDISHLQGQEELLS- 939
            .|:|.||.:::|:|.||.:....:|:.|.::.::||..:.||.::||..|||.|.|..:..|.: 
  Fly   724 FGKMSPNIVLVGYKPDWNRCRKEEVESYFSILYNAFSQRMGVALLRLPNGLDFSELSSEVTLPAN 788

Human   940 -------------SQEKSPGTKDV-----------VVSVEYSKKSDLDTSKP-----LSEKPITH 975
                         :.|..|.....           :.|:: |..|.....:|     :.....::
  Fly   789 GMGHMHTANAHGFTNELMPAANAASELLHIDSNLNLASMD-SPNSSFTMPQPAPMPNMQRNSRSY 852

Human   976 KVEEEDGKTATQPLLKKESK-GPIVPLNVADQKLLEASTQFQKKQGKNTIDVWWLFDDGGLTLLI 1039
            ||...|     :|.:...:| |..:|     |.||:|.|.|.:||.|.||||:||:||||||:|:
  Fly   853 KVTSSD-----EPAVTYHTKGGSDIP-----QNLLDAMTIFTRKQPKGTIDVFWLYDDGGLTILL 907

Human  1040 PYLLTTKKKWKDCKIRVF--IGGKINRIDHDRRAMATLLSKFRIDFSDIMVLGDINTKPKKENII 1102
            ||:::.:..|::.|:|||  ..||..  :.:.::||:||:||||.:|::::|..::.:|:.:.::
  Fly   908 PYIISMRSHWQNSKLRVFAMCHGKDE--EQEEKSMASLLTKFRIKYSELIMLKGVSEQPRADTVL 970

Human  1103 AFEEIIEPYRLHEDDKEQDIADKMKEDEPWRITDNELELYKTKTYRQIRLNELLKEHSSTANIIV 1167
            ..:.:|||:|....::             :.|||:||:....||.||:|::||:.:|||.|:::|
  Fly   971 KHKRLIEPFRRGARNE-------------FGITDDELQSMSEKTNRQLRIHELVVKHSSNASLVV 1022

Human  1168 MSLPVARKGAVSSALYMAWLEALSKDLP-PILLVRGNHQSVLTFYS 1212
            ||||:.||.|:|:.|||:|||.|:.|:. |:.|.|||...|||.||
  Fly  1023 MSLPMPRKEAISAPLYMSWLEMLTSDMKCPVALARGNQTPVLTLYS 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC12A2NP_001037.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..81
RFXV motif 1. /evidence=ECO:0000269|PubMed:16669787 80..83
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..138 457/1151 (40%)
RFXV motif 2. /evidence=ECO:0000269|PubMed:16669787 138..141 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..193 12/49 (24%)
2a30 216..1212 CDD:273347 435/1049 (41%)
Scissor helix. /evidence=ECO:0000269|PubMed:35585053, ECO:0000269|PubMed:36306358, ECO:0007744|PDB:7MXO, ECO:0007744|PDB:7N3N, ECO:0007744|PDB:7S1X, ECO:0007744|PDB:7SFL, ECO:0007744|PDB:7SMP 761..778 7/16 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 962..989 4/31 (13%)
NKCCNP_730938.1 AA_permease_2 85..1068 CDD:459263 435/1049 (41%)
Blue background indicates that the domain is not in the aligned region.

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