DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC12A1 and nkcc-1

DIOPT Version :10

Sequence 1:NP_000329.2 Gene:SLC12A1 / 6557 HGNCID:10910 Length:1099 Species:Homo sapiens
Sequence 2:NP_001255790.1 Gene:nkcc-1 / 3565648 WormBaseID:WBGene00012543 Length:1235 Species:Caenorhabditis elegans


Alignment Length:25 Identity:9/25 - (36%)
Similarity:15/25 - (60%) Gaps:2/25 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    48 RLPRTFSQAQR--DKRVEDVIAELR 70
            |..|..|.|.|  |.::.|::::||
 Worm     4 RRSRQTSNASRISDDQMIDLVSKLR 28

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC12A1NP_000329.2 RFXV motif. /evidence=ECO:0000269|PubMed:21321328 20..23
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..53 2/4 (50%)
2a30 104..1099 CDD:273347
nkcc-1NP_001255790.1 AA_permease_2 165..1235 CDD:459263
Blue background indicates that the domain is not in the aligned region.

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