DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A13 and slc6a13

DIOPT Version :10

Sequence 1:NP_057699.2 Gene:SLC6A13 / 6540 HGNCID:11046 Length:602 Species:Homo sapiens
Sequence 2:NP_001072913.1 Gene:slc6a13 / 780375 XenbaseID:XB-GENE-5947897 Length:601 Species:Xenopus tropicalis


Alignment Length:607 Identity:478/607 - (78%)
Similarity:528/607 - (86%) Gaps:11/607 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDSRVSGTTSNGE-TKPVYPVMEK--KEEDG--TLERGHWNNKMEFVLSVAGEIIGLGNVWRFPY 60
            ||::|.|..|||. ..|..|:|||  |.|||  .:|||.||||:|||||||||||||||||||||
 Frog     1 MDNKVPGAVSNGYCVPPTKPLMEKEPKMEDGDMMIERGQWNNKVEFVLSVAGEIIGLGNVWRFPY 65

Human    61 LCYKNGGGAFFIPYLVFLFTCGIPVFLLETALGQYTSQGGVTAWRKICPIFEGIGYASQMIVILL 125
            |||||||||||||||:||||||||||.||||||||||||||||||||||:||||||:||:||:||
 Frog    66 LCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTSQGGVTAWRKICPLFEGIGYSSQVIVMLL 130

Human   126 NVYYIIVLAWALFYLFSSFTIDLPWGGCYHEWNTEHCMEFQKTNGSLNGTSENATSPVIEFWERR 190
            |.|||:||||||||||:|||.:|||..|.|.||||:|::|.|.|.:.|.|. |.||.||||||||
 Frog   131 NCYYIVVLAWALFYLFNSFTSELPWASCGHSWNTENCLDFYKGNSTHNVTL-NGTSSVIEFWERR 194

Human   191 VLKISDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTL 255
            ||:|||||.::|.|.|||||||||||:||||||||||||||||||||||||||||:|||||||:|
 Frog   195 VLRISDGIDNIGGLHWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIVLLIRGVSL 259

Human   256 PGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCIALCFL 320
            |||..||||||||:|:||.|||||||||||||||:||||||||||||||||:|||||||:|||||
 Frog   260 PGALTGIQFYLYPDLSRLQDPQVWMDAGTQIFFSYAICLGCLTALGSYNKYNNNCYRDCVALCFL 324

Human   321 NSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPRAVVMLPFSPLWACCFFFMVVL 385
            |||||||||||||||||||::||||.||:|||||||||||||||||.|:||||||||.|||||:|
 Frog   325 NSGTSFVAGFAIFSILGFMAEEQGVHISDVAESGPGLAFIAYPRAVSMMPFSPLWACFFFFMVIL 389

Human   386 LGLDSQFVCVESLVTALVDMYPHVFRKKNRREVLILGVSVVSFLVGLIMLTEGGMYVFQLFDYYA 450
            ||||||||||||||||:|||||.:||||||||:||||||::||||||||||||||||||||||||
 Frog   390 LGLDSQFVCVESLVTAVVDMYPTIFRKKNRRELLILGVSMISFLVGLIMLTEGGMYVFQLFDYYA 454

Human   451 ASGMCLLFVAIFESLCVAWVYGAKRFYDNIEDMIGYRPWPLIKYCWLFLTPAVCTATFLFSLIKY 515
            |||||||||||||:|||.|||||..|||.:|.||||||..:|||||||:|||||.|||||||:||
 Frog   455 ASGMCLLFVAIFETLCVGWVYGADNFYDKVEHMIGYRPTGIIKYCWLFVTPAVCMATFLFSLVKY 519

Human   516 TPLTYNKKYTYPWWGDALGWLLALSSMVCIPAWSLYRLGTLKGPFRERIRQLMCPAEDLPQRNPA 580
            |||||||.|.|||||||:|||||||||||||.|..|:|.|:||...||.|||..|..||||:...
 Frog   520 TPLTYNKHYVYPWWGDAIGWLLALSSMVCIPLWVGYKLSTIKGSLMERFRQLTFPDPDLPQKTQC 584

Human   581 GPSAPATPRTSLLRLTELESHC 602
            .|.: .|.:.:||.    ||.|
 Frog   585 EPLS-QTAQGTLLE----ESLC 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A13NP_057699.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 9/21 (43%)
SLC6sbd_GAT2 32..575 CDD:271396 451/542 (83%)
slc6a13NP_001072913.1 SLC5-6-like_sbd 37..579 CDD:444915 451/542 (83%)

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