DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC6A13 and GlyT

DIOPT Version :9

Sequence 1:NP_057699.2 Gene:SLC6A13 / 6540 HGNCID:11046 Length:602 Species:Homo sapiens
Sequence 2:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster


Alignment Length:618 Identity:249/618 - (40%)
Similarity:362/618 - (58%) Gaps:67/618 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDSRVSGTTSNGETKPVYPVMEKKEEDGTLERGHWNNKMEFVLSVAGEIIGLGNVWRFPYLCYKN 65
            :|:...|....||::.              |||.|..:.:|:||:.|..:|||||||||||||.|
  Fly    40 LDATGPGAGGAGESEH--------------ERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNN 90

Human    66 GGGAFFIPYLVFLFTCGIPVFLLETALGQYTSQGGVTAWRKICPIFEGIGYASQMIVILLNVYYI 130
            |||||.||:.:.|...|:|:..:|.:.|||.:.|.|..:|:.||:|.|:|....::..::.:||.
  Fly    91 GGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYN 155

Human   131 IVLAWALFYLFSSFTIDLPWGGCYHEWNTEHCMEF------QKTNGSLN-GTSENATS------- 181
            :::||.:||:|:||...|||..|...|:|::|..:      :.|||:.. .|..||||       
  Fly   156 LIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNIT 220

Human   182 ----------PVIEFWERRVLKISDGIQHLGALRWELALCLLLAWVICYFCIWKGVKSTGKVVYF 236
                      |..|::...||.:|.||:..|:::..||.||.|||.|.:.|:.|||:|:||||||
  Fly   221 TLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYF 285

Human   237 TATFPYLMLVVLLIRGVTLPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTALG 301
            ||.|||::||:|.:||||||||:.||.|||.|:..:|.:.|||.||..||||:.:...|.|..|.
  Fly   286 TALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLS 350

Human   302 SYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPRAV 366
            ||||:.||||:|.:.:.|.|..|||.||..||||:||::.|..|.:.:|.:.|.|||||.||..|
  Fly   351 SYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVV 415

Human   367 VMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPHVFRKKNRREVLILGVSVVSFLVG 431
            ..||.||:||..||.|::.|||||||..:|::.||::|.:|::   :..:..::|.|::..::.|
  Fly   416 TRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNL---RQYKIWVVLSVAIFGYIGG 477

Human   432 LIMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGAKRFYDNIEDMIGYRPWPLIKY-- 494
            |...|..|||..||.|.|||:...|| :||.|.:.:||:||::||.::|:.|||.|.|....:  
  Fly   478 LGFTTNSGMYWLQLMDKYAANWSVLL-IAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWG 541

Human   495 -CWLFLTPAVCTATFLFSLIKYTPLTYNKKYTYPWWGDALGWLLALSSMVCI------PAWSLYR 552
             .|.::|||.......|:.::|.|..|. .|.||.|.||:||::.|..::.|      ..|    
  Fly   542 IMWRYITPATLLFILFFNWVEYKPAKYG-HYVYPMWADAVGWIVGLLPVLVIFLVAFQEIW---- 601

Human   553 LGTLKGP----FRERIRQLMCPAEDLPQRNPAG 581
                :.|    ||:||:.|:.|..:.   .|||
  Fly   602 ----RAPMSLSFRDRIKHLLQPTAEW---GPAG 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A13NP_057699.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 4/20 (20%)
SLC6sbd_GAT2 32..575 CDD:271396 241/579 (42%)
GlyTNP_611836.2 SNF 57..603 CDD:249680 234/558 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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