DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC6A13 and List

DIOPT Version :9

Sequence 1:NP_057699.2 Gene:SLC6A13 / 6540 HGNCID:11046 Length:602 Species:Homo sapiens
Sequence 2:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster


Alignment Length:582 Identity:200/582 - (34%)
Similarity:312/582 - (53%) Gaps:38/582 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    20 VMEKKEEDGTLERGHWNNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLVFLFTCGIP 84
            :.:|.|:........|.|.:||:.|.....:||||:|||||:.::||||.|.||||:.|...|.|
  Fly     6 ISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRP 70

Human    85 VFLLETALGQYTSQGGVTAWRKICPIFEGIGYASQMIVILLNVYYIIVLAWALFYLFSSFTIDLP 149
            |:.||.:|||:|.:|.|.|: .:.|:.:|:.....:.......||..::|..|.:..:||..:||
  Fly    71 VYYLEISLGQFTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELP 134

Human   150 WGGCYHEWNTE-HCMEFQKTNGSLNGTSENATSPVIEFWERRVL----KISDGIQHLGALRWELA 209
            |..|:..|.|: |....|.::|.:        ||...::||.:|    .|.:|   |....|:|.
  Fly   135 WSRCWESWGTDCHDGNAQNSSGKM--------SPAQLYFEREILHEVPNIDNG---LSLPNWQLV 188

Human   210 LCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTLPGAAQGIQFYLYPNLTRLW 274
            .||.:||::....:.:|:||:||..||...|||::|::||:|.||||||..||.::..|....|.
  Fly   189 ACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELL 253

Human   275 DPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFM 339
            :|.||..|.||:|||.|||.|.|....|||.::.|.|.|.:.:..::|.:|.:||...|.|||.:
  Fly   254 NPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNL 318

Human   340 SQEQGVP-ISEVAESGPGLAFIAYPRAVVMLPFSP-LWACCFFFMVVLLGLDSQFVCVESLVTAL 402
            ::|.|.| |..|.:.|.|||||:||.|:....:.| ::|..||.|:.:||:.|.......::..:
  Fly   319 ARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVI 383

Human   403 VDMY----PHVFRKKNRREVLILGVSVVSFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFE 463
            .|.:    |.:::       |..|::|:.|.|.::.:|.||.::..|.|:|..| ...|.:||.|
  Fly   384 RDQFGLRSPPIWK-------LASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVS-FTALILAIGE 440

Human   464 SLCVAWVYGAKRFYDNIEDMIGYRPWPLIKYCWLFLTPAVCTATFLFSLIKYTPLTYNKKYTYPW 528
            .:.|||:||..||.::|:.|:|.......:.||.|:||.:.||..::.|:..:.|.| |...||.
  Fly   441 LVAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEY-KGVGYPT 504

Human   529 WGDALGWLLALSSMVCIPAWSLYRLGTLK---GPFRERIRQLMCPAEDLPQRNPAGPSAPAT 587
            .....|..||...::.:|.|::|.:...:   |.|.:|||....|::..   .||.....||
  Fly   505 LAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTW---GPANVQLDAT 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A13NP_057699.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 0/1 (0%)
SLC6sbd_GAT2 32..575 CDD:271396 194/556 (35%)
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 176/489 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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