DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A12 and Gat

DIOPT Version :10

Sequence 1:NP_003035.3 Gene:SLC6A12 / 6539 HGNCID:11045 Length:614 Species:Homo sapiens
Sequence 2:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster


Alignment Length:573 Identity:301/573 - (52%)
Similarity:405/573 - (70%) Gaps:24/573 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    31 DQVKDRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFVCGIPVFFLEVA 95
            :|:.|||.|::||:|:|||.|..|||||||||||||||||||||.:||.|..|:.|||:||:|:|
  Fly    53 EQLPDRGSWSSKMDFILSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELA 117

Human    96 LGQYTSQGSVTAWRKICPLFQGIGLASVVIESYLNVYYIIILAWALFYLFSSFTSELPWTTCNNF 160
            |||..:.|.:..: ||.|:|:|||.|:.|:..::|||||:|||||:||.|.|..:::||.||||:
  Fly   118 LGQMLTIGGLGVF-KIAPIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNW 181

Human   161 WNTE-----------HCTD-FLNHS-------GAGTVTPFENFTSPVMEFWERRVLGITSGIHDL 206
            |||.           ||.| .:|.:       .|..:|..| .|.||.||||||.|.|:.||.::
  Fly   182 WNTVNCVSQYERKNLHCWDKIINGTTQKVCSVSALNITSLE-LTDPVKEFWERRALQISHGIEEI 245

Human   207 GSLRWELALCLLLAWVICYFCIWKGVKSTGKVVYFTATFPYLMLVILLIRGVTLPGAYQGIIYYL 271
            |::|||||..|||.|::||||||||||.|||||||||.|||::|.|||:||:|||||.:||.:|:
  Fly   246 GNIRWELAGTLLLVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYI 310

Human   272 KPDLFRLKDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAGFV 336
            .|:..:|.:.:||:||.||||||:.:..|.|.|||||||:.||.|||.:.:|.:||:||..||||
  Fly   311 IPNFSKLTNSEVWIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFV 375

Human   337 VFSILGFMSQEQGVPISEVAESGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVE 401
            :||::|||:.||..|:::||.|||||||:.:|.||..:|.|.:||||||.||:.:||||||..:|
  Fly   376 IFSVIGFMAHEQQRPVADVAASGPGLAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTME 440

Human   402 CLVTASIDMFPRQLRKSGRRELLILTIAVMCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLSL 466
            ..:||.||.:|:.|||  |:|:.|..:..:.||:||..:|:|||||||:.|.||.||.|||:|..
  Fly   441 GFITAIIDEWPQLLRK--RKEIFIAIVCALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIF 503

Human   467 FEVVCISWVYGADRFYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLKYNNVYVY 531
            ||.|.|||.||.|||||.|:|||||.|....|..|...||.:||..|.|::.::||:||.: |.|
  Fly   504 FECVSISWCYGVDRFYDGIKDMIGYYPTVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLD-YSY 567

Human   532 PPWGYSIGWFLALSSMVCVPLFVVITLLKTRGPFRKRLRQLITPDSSLPQPKQ 584
            |.|.::.|||.|||||:.:||::.....:|.|...:::|.|:..|..:.:.::
  Fly   568 PWWAHAFGWFTALSSMLYIPLYMFWLWKRTPGELSEKIRALVRIDEDVTRLRE 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A12NP_003035.3 SLC6sbd_BGT1 35..575 CDD:212080 299/558 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 576..614 1/9 (11%)
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 298/557 (54%)

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