DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A11 and GlyT

DIOPT Version :9

Sequence 1:NP_055044.1 Gene:SLC6A11 / 6538 HGNCID:11044 Length:632 Species:Homo sapiens
Sequence 2:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster


Alignment Length:616 Identity:253/616 - (41%)
Similarity:364/616 - (59%) Gaps:60/616 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    27 GCSSG-----------GAAPARHPRVKRDKAVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLC 80
            ||:||           ||..|       .::.||||.|..:.:|:||:.|..:||||||||||||
  Fly    30 GCASGTALIQLDATGPGAGGA-------GESEHERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLC 87

Human    81 YKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNV 145
            |.|||||||||:.:..:..|:|:.|:|.:.||:.:.|.:..:|:.||||.|:|....::.|.:.:
  Fly    88 YNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVML 152

Human   146 YYIIILAWAIFYLSNCFTTELPWATCGHEWNTENCVEFQKLNV-----SNYSHVSLQNATS---- 201
            ||.:|:||.|||:...|...|||..|...|:|:.|..:.:.:.     ..|...:..||||    
  Fly   153 YYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAEN 217

Human   202 -------------PVMEFWEHRVLAISDGIEHIGNLRWELALCLLAAWTICYFCIWKGTKSTGKV 253
                         |..|::.:.||.:|.|||..|:::..||.||..||||.:.|:.||.:|:|||
  Fly   218 NITTLALGALKRPPAEEYFNNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKV 282

Human   254 VYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGTQIFFSYAICLGCLT 318
            ||.||.|||::|:||.:|||||||||.||.|||.||..:|::.|||.||..||||:.:...|.|.
  Fly   283 VYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLI 347

Human   319 ALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYP 383
            .|.|||.::||||:|.:::...|..|||.||..|||::||:|:|..|.:.:|.:.|.|||||.||
  Fly   348 TLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYP 412

Human   384 KAVTMMPLSPLWATLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKVFRRGYRRELLILALSVISY 448
            :.||.:|:||:||.|||:||:.|||||||..:|::.||::|.:|.:  |.| :..::|::::..|
  Fly   413 EVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDRFPNL--RQY-KIWVVLSVAIFGY 474

Human   449 FLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECICIGWVYGSNRFYDNIEDMIGYRPPSLIK 513
            ..||...|..|||..||.|.|||:...|| :||.|||.|.|:|||.||.::|:.|||.|     .
  Fly   475 IGGLGFTTNSGMYWLQLMDKYAANWSVLL-IAISECILIAWIYGSQRFLNDIQGMIGKR-----S 533

Human   514 W--------CWMIMTPGICAGIFIFFLIKYKPLKYNNIYTYPAWGYGIGWLMALSSMLCIPLWIC 570
            |        .|..:||.....|..|..::|||.||.: |.||.|...:||::.|..:|.|.|...
  Fly   534 WFWNFFWGIMWRYITPATLLFILFFNWVEYKPAKYGH-YVYPMWADAVGWIVGLLPVLVIFLVAF 597

Human   571 ITVWKTEGTLP--EKLQKLTTPSTDLKMRGK 599
            ..:|:...:|.  ::::.|..|:.:....|:
  Fly   598 QEIWRAPMSLSFRDRIKHLLQPTAEWGPAGR 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A11NP_055044.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 7/24 (29%)
SLC6sbd_GAT3 49..590 CDD:212077 243/572 (42%)
GlyTNP_611836.2 SNF 57..603 CDD:249680 240/555 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 1 1.000 - - FOG0000575
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.