DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC6A9 and snf-7

DIOPT Version :9

Sequence 1:NP_964012.2 Gene:SLC6A9 / 6536 HGNCID:11056 Length:706 Species:Homo sapiens
Sequence 2:NP_499702.2 Gene:snf-7 / 176723 WormBaseID:WBGene00004906 Length:705 Species:Caenorhabditis elegans


Alignment Length:658 Identity:199/658 - (30%)
Similarity:320/658 - (48%) Gaps:100/658 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    95 DQNLKRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLIFCGIPLFFMELS 159
            |:...||     ||..|:|:|.||||||:||||...|:|||.:|:..|.:..|...:|...||.:
 Worm    65 DRQAFRG-----IESFLSSLGQAVGLGNIWRFPTTAYKNGGLSFLIAYVVCGILFAVPAIHMEFA 124

Human   160 FGQFASQGCLGVW-RISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFSSMTHVLPWAYCNNP 223
            .||:|::.....: |:.|:.:|||:...:|...||:||.:||.....|.| ::.:....:.|||.
 Worm   125 LGQYAAKSPPAAFRRMMPILEGVGWMTCLVGAIIGVYYMIVISWIVLYLF-NIIYATKISKCNND 188

Human   224 WNTHD------------CAGVLDASNL--TNGSRPAALPSNLSHLLNHSLQRTS-----PSEEYW 269
            ||.:.            |:|.:..|:|  ||.:|.|::.|.:.::.......|:     .:|:::
 Worm   189 WNKNRSTICYEGVKQKLCSGYMLNSSLVMTNLTRNASVHSKMMYIDGKCQNATNMKLAVGTEQFF 253

Human   270 RLYVLKLSDDIGNFGEVRLPLLGCLGVSWLVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRG 334
            ..:|:|.|....:|..:.:|:|..:.|.|::..:.||||:|:.||:.|:|...||.::..|.:||
 Worm   254 TNFVVKPSTGFTDFNSINVPMLAAVAVCWVIAIISLIRGMKAIGKLSYYTVLLPYAIIIALMIRG 318

Human   335 VTLEGAFDGIMYYLTPQWDK-----------ILEAKVWGDAASQIFYSLGCAWGGLITMASYNKF 388
            :|||||..|:.:..   |.|           :.:..||..|..|:.:||....|||:.:.||||.
 Worm   319 LTLEGASTGLHFLF---WGKPNEYGHYDFAGLYDPDVWIAALMQMCFSLSIGQGGLMNIGSYNKK 380

Human   389 HNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVS------RVADHGPGLAFVAYPEA 447
            ..|.|||:.::.:.:...|:..|..:||.|||:|....:.:|      .|...|..|||:.|.||
 Worm   381 TYNWYRDAYLVVLCDTLMSLLGGTAVFSTLGFLAEQRNISISNPKGFNEVVQEGHALAFIVYTEA 445

Human   448 LTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLG 512
            :..:|...||..|||.||.|||:.|:..::||:.:.:.|..  .::.|.:....:.|:...||||
 Worm   446 IAQMPYPFLWYALFFVMLFLLGISTEIVIIETVCSCLADRF--HYLRQHRWITVVTVSTTFFLLG 508

Human   513 IPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVAIMYIYGHRNYFQDIQMM-----------LGF 566
            :.:||.||.||..|.|.|:|..|..:.:.|||:.:.:.||..|:..||:.|           || 
 Worm   509 LVMTSDAGFYWFDLYDEYSAGVSATIGTAIMCLTVCWCYGLDNFRADIREMWEEPESRLDKYLG- 572

Human   567 PPPLFFQICWRFVSPAIIFFILVFTVI--QYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAM 629
            |....:.|.||||:| |...:::|..|  :..|...:..:||....|.|:.:|......:|::|.
 Worm   573 PGAYVWTIVWRFVTP-ICCLVIMFAWIWDKKYPFKGDSKKYPPVFDAFGWFVAALPFFVVPVFAG 636

Human   630 FRLCRTDGDTLLQRLKNATKPSR--------------------DWGPALLEHRTGRYAPTIAPSP 674
            |         .::|.|:...|.|                    :|     :.:.|...|.:.|..
 Worm   637 F---------AIKRFKDLNIPIRGVFMVQKQHPAYDRISEKWPEW-----KQKIGDKLPELEPGE 687

Human   675 ---EDGFE 679
               |||.|
 Worm   688 DDLEDGLE 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A9NP_964012.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
SLC6sbd_GlyT1 84..667 CDD:212067 193/641 (30%)
snf-7NP_499702.2 SLC6sbd 70..598 CDD:271359 176/540 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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