DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC6A6 and GlyT

DIOPT Version :9

Sequence 1:NP_001127839.2 Gene:SLC6A6 / 6533 HGNCID:11052 Length:721 Species:Homo sapiens
Sequence 2:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster


Alignment Length:633 Identity:255/633 - (40%)
Similarity:354/633 - (55%) Gaps:64/633 - (10%)


- Green bases have known domain annotations that are detailed below.


Human   127 PGTRPEDEAEGKPPQREKWSSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGS 191
            ||.....|:|   .:|..|:.:.||:||:.|..||||||||||||||.|||||||||:.|.|..:
  Fly    45 PGAGGAGESE---HERGTWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIA 106

Human   192 GLPVFFLEIIIGQYTSEGGITCWEKICPLFSGIGYASVVIVSLLNVYYIVILAWATYYLFQSFQK 256
            |||:.|:|:..|||.:.|.:..:.:.||||.|:|...:::.:::.:||.:|:||..:|:|.||..
  Fly   107 GLPLMFMELSFGQYAALGPVAVYRRFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAP 171

Human   257 ELPWAHCNHSWNTPHCME----DTMRKNKSVWITISSTNFTS-----------------PVIEFW 300
            .|||.:|..:|:|.:|..    |........:...:..|.||                 |..|::
  Fly   172 VLPWQNCEPAWSTKYCFSYAQADQCEATNGTYYLRTCHNATSAAENNITTLALGALKRPPAEEYF 236

Human   301 ERNVLSLSPGIDHPGSLKWDLALCLLLVWLVCFFCIWKGVRSTGKVVYFTATFPFAMLLVLLVRG 365
            ...||.||.||:..||:|..||.||.|.|.:.|.|:.|||:|:||||||||.||:.:|::|.|||
  Fly   237 NNFVLGLSKGIEETGSIKLSLAACLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRG 301

Human   366 LTLPGAGAGIKFYLYPDITRLEDPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNSYRDCMLL 430
            :|||||..||.|||.||..:|.:.|||.||..||||:.:...|.:.:|.||||:..|.|:|.:::
  Fly   302 VTLPGASTGILFYLTPDWKQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIV 366

Human   431 GCLNSGTSFVSGFAIFSILGFMAQEQGVDIADVAESGPGLAFIAYPKAVTMMPLPTFWSILFFIM 495
            ...|..|||.:|..||||:||:|.|..||:..|.:.|.|||||.||:.||.:|:...|::|||:|
  Fly   367 AFCNIATSFFAGLVIFSIIGFLAHELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVM 431

Human   496 LLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAFVCSIS---YLLGLTMVTEGGMYVFQ 557
            ||.|||||||..:|...|:::|.:|:.      |:..|..|.|::   |:.||...|..|||..|
  Fly   432 LLTLGLDSQFALMETVTTAILDRFPNL------RQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQ 490

Human   558 LFDYYAASGVCLLWVAFFECFVIAWIYGGDNLYDGIEDMIGYRPGPWMKY---SWAVITPVLCVG 619
            |.|.|||:...|| :|..||.:||||||.....:.|:.|||.|...|..:   .|..|||...:.
  Fly   491 LMDKYAANWSVLL-IAISECILIAWIYGSQRFLNDIQGMIGKRSWFWNFFWGIMWRYITPATLLF 554

Human   620 CFIFSLVKYVPLTYNKTYVYPNWAIGLGWSLALSSMLCVPLVIVIRLCQTEGP----FLVRVKYL 680
            ...|:.|:|.|..|.. ||||.||..:||.:.|..:|.:.||....:.:  .|    |..|:|:|
  Fly   555 ILFFNWVEYKPAKYGH-YVYPMWADAVGWIVGLLPVLVIFLVAFQEIWR--APMSLSFRDRIKHL 616

Human   681 LTPREPNRWA----------VEREGATPYNSRTVMNGALVKPTHIIVE 718
            |.|..  .|.          .||..:..|:.        |..|.|::|
  Fly   617 LQPTA--EWGPAGRPCVNLHAERYQSQNYDG--------VTNTKILIE 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A6NP_001127839.2 SLC6sbd_TauT 142..683 CDD:271398 242/571 (42%)
GlyTNP_611836.2 SNF 57..603 CDD:249680 236/555 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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