| Sequence 1: | NP_001036.1 | Gene: | SLC6A4 / 6532 | HGNCID: | 11050 | Length: | 630 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_034614.2 | Gene: | Slc6a4 / 15567 | MGIID: | 96285 | Length: | 630 | Species: | Mus musculus |
| Alignment Length: | 630 | Identity: | 583/630 - (92%) |
|---|---|---|---|
| Similarity: | 601/630 - (95%) | Gaps: | 0/630 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 METTPLNSQKQLSACEDGEDCQENGVLQKVVPTPGDKVESGQISNGYSAVPSPGAGDDTRHSIPA 65
Human 66 TTTTLVAELHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAIFGGI 130
Human 131 PLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFTDQL 195
Human 196 PWTSCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIHRSKGLQDLGGISWQLALCIM 260
Human 261 LIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGATLPGAWRGVLFYLKPNWQKLLETGV 325
Human 326 WIDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFVIFTVLGYMAEMR 390
Human 391 NEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFP 455
Human 456 HVWAKRRERFVLAVVITCFFGSLVTLTFGGAYVVKLLEEYATGPAVLTVALIEAVAVSWFYGITQ 520
Human 521 FCRDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSPPQLRLFQYNYPYWSIILGYCIGTSS 585
Human 586 FICIPTYIAYRLIITPGTFKERIIKSITPETPTEIPCGDIRLNAV 630 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SLC6A4 | NP_001036.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..59 | 46/57 (81%) | |
| 5HT_transport_N | 24..64 | CDD:397524 | 29/39 (74%) | ||
| SLC6sbd_SERT | 79..615 | CDD:271399 | 506/535 (95%) | ||
| Interaction with RAB4A | 616..624 | 7/7 (100%) | |||
| Slc6a4 | NP_034614.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..63 | 47/61 (77%) | |
| 5HT_transport_N | 24..64 | CDD:281488 | 29/39 (74%) | ||
| SLC6sbd_SERT | 79..615 | CDD:271399 | 506/535 (95%) | ||
| Interaction with RAB4A. /evidence=ECO:0000250 | 616..624 | 7/7 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83966199 | |
| Domainoid | 1 | 1.000 | 1032 | 1.000 | Domainoid score | I1553 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H817 | |
| Inparanoid | 1 | 1.050 | 1212 | 1.000 | Inparanoid score | I4305 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S2944 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG53371 | |
| OrthoDB | 1 | 1.010 | - | - | D250396at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000975 | |
| OrthoInspector | 1 | 1.000 | - | - | oto123537 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101590 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR11616 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4270 |
| SonicParanoid | 1 | 1.000 | - | - | X639 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 18 | 18.390 | |||||