DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A3 and CG8850

DIOPT Version :9

Sequence 1:NP_001035.1 Gene:SLC6A3 / 6531 HGNCID:11049 Length:620 Species:Homo sapiens
Sequence 2:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster


Alignment Length:568 Identity:195/568 - (34%)
Similarity:305/568 - (53%) Gaps:14/568 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    33 LVKEQNGVQLTSSTLTNPRQSPVEAQDRETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGA 97
            ::....|.:||    .|.......:..|:.|.:.::||.|.|..:|.|.||||||::..:|||||
  Fly    34 VIYSAEGEELT----INCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGA 94

Human    98 FLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPILKGVGFTVILISLYVGFFYNVIIAW 162
            ||:||::.:::.|.|::|:|:.:|||:..|....:.:.||::|:.:..:..:.....:|..|:|.
  Fly    95 FLIPYVIVLLLIGRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMAL 159

Human   163 ALHYLFSSFTTELPWIHCNNSWNSPNCSDAHPGDSSGDSSGLNDTFGTTPAAEYFERGVLHLHQS 227
            .:.||.:||:..|||.:|...|.. :|. |....::.|||.:.   |.:.|..:|.:.||...:|
  Fly   160 TIRYLVASFSEVLPWTYCLVEWGK-SCV-ATGATAANDSSIVQ---GVSSAELFFTQTVLREPES 219

Human   228 HGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAID 292
            ...:.||.|.|.|..||:...|::...|.||:::|||..:..|..|||::..||:|.||||||..
  Fly   220 LDDNGLGTPSWDLVLCLLATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQ 284

Human   293 GIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIVTTSINSLTS 357
            ||..:|...:.:|....||..|.||:.|||.:.||.|:.::|:|.|..|.::|.|:.|:|:||||
  Fly   285 GIVYFLKPQWSQLLNPHVWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTS 349

Human   358 FSSGFVVFSFLGYMA-QKHSVPIGDVAKDGPGLIFIIYPEAIATLP-LSSAWAVVFFIMLLTLGI 420
            ..:|.::|..||.:| :.::..|..|.|.|.||.||.||||||... |...:||:||.|||.|||
  Fly   350 ILAGCIIFGILGNLAFETNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGI 414

Human   421 DSAMGGMESVITGLIDEFQLLHRHRELFTLFIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSIL 485
            .|.:|...:|:..:.|.|  .|....|..:...:..||..|..:|.||.:|..|:|.:......|
  Fly   415 GSNIGMASAVVNVVKDRF--THLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIAL 477

Human   486 FGVLIEAIGVAWFYGVGQFSDDIQQMTGQRPSLYWRLCWKLVSPCFLLFVVVVSIVTFRPPHYGA 550
            ...:.|.:.|.|.|||.:...||:.|...:.|.|||:||.:|:|..:..|:|..:.::.|..|..
  Fly   478 VLAIAELLAVGWIYGVKRICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRG 542

Human   551 YIFPDWANALGWVIATSSMAMVPIYAAYKFCSLPG-SFREKLAYAIAP 597
            ..:|......||:|....:..:|.:|.......|| :|..|...|:.|
  Fly   543 VQYPPVYYMAGWIIWGLGVLQLPFWALVTIYQQPGKTFGSKFGLAMQP 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A3NP_001035.1 SLC6sbd_DAT1 60..614 CDD:212083 191/541 (35%)
Interaction with TGFB1I1. /evidence=ECO:0000269|PubMed:12177201 561..590 8/29 (28%)
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 176/480 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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