DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A2 and List

DIOPT Version :9

Sequence 1:NP_001165975.1 Gene:SLC6A2 / 6530 HGNCID:11048 Length:628 Species:Homo sapiens
Sequence 2:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster


Alignment Length:549 Identity:196/549 - (35%)
Similarity:305/549 - (55%) Gaps:19/549 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    54 QPRETWGKKIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQ 118
            :|.|.||..::||.|.:..:|.|.|:|||||:.::||||.|:|||.:.|::.|.|::|:|::|||
  Fly    16 KPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQ 80

Human   119 YNREGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFSSFTLNLPWTDCGHTWNSP 183
            :...|....:.:.|..|||....:|.......||:.|:|.:|.:..:||...|||:.|..:|.: 
  Fly    81 FTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESWGT- 144

Human   184 NCTDPKLLNGSVLGNHTKYSKYKFTPAAEFYERGVLHLHESSGI-HDIGLPQWQLLLCLMVVVIV 247
            :|.|         || .:.|..|.:||..::||.:  |||...| :.:.||.|||:.||.:..:|
  Fly   145 DCHD---------GN-AQNSSGKMSPAQLYFEREI--LHEVPNIDNGLSLPNWQLVACLAIAWLV 197

Human   248 LYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEATVWIDAA 312
            :...|.:|:|:|||..:.....||.||.:||:..||||||.:||..:....:..|....||..|.
  Fly   198 IGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAV 262

Human   313 TQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSSINCITSFVSGFAIFSILGYMAHE-HKVNI 376
            ||:||||...||.||.:||||.|:.|.|.|.::.::::..:|.::|...|.|||.:|.| ...:|
  Fly   263 TQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPDI 327

Human   377 EDVATEGAGLVFILYPEAISTLS-GSTFWAVVFFVMLLALGLDSSMGGMEAVITGLADDFQVLKR 440
            ..|...||||.||.|||||:... ....:||:||:||..||:.|::|....::..:.|.|.:...
  Fly   328 GSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSP 392

Human   441 HRKLFTFGVTFSTFLLALFCITKGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSNDI 505
            .......|:|...|.:::..:|.||.::|.|:|.:....:.|...:.|.:.|:|.|||:||..||
  Fly   393 PIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDI 457

Human   506 QQMMGFRPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYIFPPWANWVGWGIALSSMVLVP 570
            :.|||...|.||||||:|::|..:..|::..:::...|.|....:|..|:..|..:|...::.:|
  Fly   458 KFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFGCFLATLGLIQLP 522

Human   571 ---IYVIYKFLSTQGSLWERLAYGITPEN 596
               ||.|||.....||.|:|:.....|.:
  Fly   523 GWAIYAIYKKRGHNGSFWQRIRAACKPSD 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A2NP_001165975.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
SLC6sbd_NET 56..612 CDD:212081 195/547 (36%)
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 178/482 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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