DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A2 and ine

DIOPT Version :9

Sequence 1:NP_001165975.1 Gene:SLC6A2 / 6530 HGNCID:11048 Length:628 Species:Homo sapiens
Sequence 2:NP_001162871.1 Gene:ine / 33659 FlyBaseID:FBgn0011603 Length:943 Species:Drosophila melanogaster


Alignment Length:616 Identity:236/616 - (38%)
Similarity:354/616 - (57%) Gaps:48/616 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     2 LLARMNPQVQPENNGADTGPEQPLRARKTAELLVVKERNGVQCLLAPRDGDAQPRET-WGKKIDF 65
            |...:|||..|. .|.|........:.:||:|                    :||:. |..|:.|
  Fly   303 LFDMVNPQTPPP-LGVDDDDSYLDMSDETAQL--------------------KPRQQHWANKMQF 346

Human    66 LLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYMELALGQYNREG-AATVWK 129
            :|:.:|::|.|.|||||||:|||:|||.||:||.:.|.|..:||.:|||::|||...| ...:.:
  Fly   347 VLACIGYSVGLGNVWRFPYMCYKSGGGVFLVPYCIILFICSIPLLFMELSVGQYTGRGPIGALGQ 411

Human   130 ICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFSSFTLNLPWTDCGHTWNSPNCTDP--KLLN 192
            :||.|||.|.|.::::..:..||:|||.:|:||.|:||...:||.||.:.||:|:|..|  |.:|
  Fly   412 LCPLFKGAGLASVVVSFLMSTYYSVIIGYSIYYFFTSFKTEMPWIDCNNRWNTPDCWVPQRKGIN 476

Human   193 GSVLGNHTKYSKYKFTPAAEFYERGVLHLHESSGIHDIGLPQWQLLLCLMVVVIVLYFSLWKGVK 257
            .|......       ||:.||:|..||.:  |.|:...|:.:|:|..||:...:::||:.||.:|
  Fly   477 ASAPDTSR-------TPSEEFFENKVLQI--SGGLEYPGMMRWELFACLICAWLMVYFATWKSIK 532

Human   258 TSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEATVWIDAATQIFFSLGAG 322
            :|.||.:.|||.|:.::.:|:|..|||.||:.|:..:....:..||.|.|||:||:|.|.|||..
  Fly   533 SSAKVRYFTATFPFVLIIILMVRAVTLDGAAEGLRFFFRPKWSELKNANVWINAASQNFNSLGIT 597

Human   323 FGVLIAFASYNKFDNNCYRDALLTSSINCITSFVSGFAIFSILGYMAHEHKVNIEDVATEGAGLV 387
            ||.:|:||||||::||..||.:..|::|.|||.:.|...||.||.:|.|...|:.||..:|.|::
  Fly   598 FGSMISFASYNKYNNNILRDTVAVSAVNMITSLLVGIFAFSTLGNLALEQNTNVRDVIGDGPGMI 662

Human   388 FILYPEAISTLSGSTFWAVVFFVMLLALGLDSSMGGMEAVITGLADDF-QVLKRHRKLFTFGVTF 451
            |::||:|::.:..:..|||:||.|||.|||:|....:|.|:|.:.|.| :.:|||.......|.|
  Fly   663 FVVYPQAMAKMPYAQLWAVMFFFMLLCLGLNSQFAIVEVVVTSIQDGFPRWIKRHLGYHEIVVLF 727

Human   452 STFLLALF---CITKGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSNDIQQMMGFRP 513
            ...:..||   .|.:||||...|:|.:||..:|:|....:.|.::||||..|.|.:::||.|..|
  Fly   728 VCVISCLFGMPNIIQGGIYYFQLMDHYAASVTIMFLAFCQMIAIAWFYGTGRLSKNVKQMTGKAP 792

Human   514 GLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDD--YIFPPWANWVGWGIALSSMVLVPIYVIYK 576
            ..|.|.||..:.|..|..:.|:|:||:...||.:  |.:|.||..:||..|..|::.:|.|.:..
  Fly   793 SFYLRSCWLVLGPCLLFAIWVLSLINYHEPTYHNGRYTYPDWAYGIGWMFASFSLICIPGYAVIN 857

Human   577 FLSTQG-SLWERLAYGITPE-------NEHH 599
            ||.:.| :.|||:...:.|.       .|||
  Fly   858 FLRSSGDTFWERIRNTLRPNIYECKICGEHH 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A2NP_001165975.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 7/20 (35%)
SLC6sbd_NET 56..612 CDD:212081 225/562 (40%)
ineNP_001162871.1 SLC5-6-like_sbd 337..876 CDD:294310 220/547 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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