DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SKOR2 and Snoo

DIOPT Version :10

Sequence 1:NP_001264992.1 Gene:SKOR2 / 652991 HGNCID:32695 Length:1015 Species:Homo sapiens
Sequence 2:NP_609164.3 Gene:Snoo / 5740414 FlyBaseID:FBgn0085450 Length:1223 Species:Drosophila melanogaster


Alignment Length:1310 Identity:268/1310 - (20%)
Similarity:398/1310 - (30%) Gaps:490/1310 - (37%)


- Green bases have known domain annotations that are detailed below.


Human     7 PGPNDI------LLASPSSAFQPDT----LSQPRPGHANLKPNQVGQVILYGIPIVSLVIDGQER 61
            |.|.|:      ...:|...:.|.|    ||||....|:....::.:..|.|..|....:.|:.|
  Fly    72 PEPQDLHHHECSTRGTPPQIYSPATPPRELSQPILSVADAGCGELYETKLEGKTIGCFSVGGEMR 136

Human    62 LCLAQISNTLLKNFSYNEIHNRRVALGITCVQCTPVQLEILRRAGAMPISSRRCGMITKREAERL 126
            |||.|..|.:|.:||..:|:.....|||.|.|||..||...:.|..:|...:..|:||:.:||||
  Fly   137 LCLPQFLNNVLNDFSLEQINRIFDELGIYCSQCTHDQLVEFKAAKILPSDVKASGLITRTDAERL 201

Human   127 CKSFL-GENRPPKLP------DNFAFDVSHECAWGCRGSFIPARYNSSRAKCIKCSYCNMYFSPN 184
            |.:.| ..:|...:|      ...:|.|.|:|...|.|...|..|:..:..||||..|:.:|||.
  Fly   202 CAALLHRSDRNSYVPIESLAKGALSFHVYHKCFGKCEGICTPDMYSYQKPTCIKCLECDGWFSPQ 266

Human   185 KFIFHSHRTPDAKYTQPDAANFNSWRRHLKLT-DKSPQDELVFAWEDVKAMFNGGSRKRALPQPG 248
            ||:.|.||..: .:|.....:..:|..:|.:. |...:::.....:.:|.:        .|.:  
  Fly   267 KFVGHVHRKFE-NHTCHWGFDSRNWHDYLHVALDVENREKYQIILDQLKEV--------ELKE-- 320

Human   249 AHPACHPLSSVK-AAAVAAAAAVAGGGGLLG----PH-LLGAPPPPPPPPPPLAELAGAPHAHHK 307
            .|.|...|...| .|.:.....:.|.|.:||    || |:||..||||||             .|
  Fly   321 MHKAQRELEHKKRKAEMLMDDGMLGSGPVLGLAGHPHGLVGALAPPPPPP-------------MK 372

Human   308 RPRFDDDDDSLQ----EAAVVAAASLSAAAASLSVAAASGGAGTGGGGAGGGCVAGVGVGAGAGA 368
            :|:.|......|    :.|.|||   ||......|..|.             ||           
  Fly   373 QPQMDIPSGKKQLQQLKGATVAA---SALEYQYQVMYAH-------------CV----------- 410

Human   369 GAGAGAKG--------PRSYP---------VIPVPSKGSFGGVLQKFPGCGGLFPHPYTFPA--- 413
                 .|.        |.|:|         |...|                  :||...:|.   
  Fly   411 -----QKEREREREHLPHSHPLPRQHRAVLVATTP------------------YPHLPQYPTPPT 452

Human   414 --AAAAFSLCHKKEDAGAAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFCMFWPP--R 474
              :::||. ....:...|...|.|            |.||.|            |:....||  :
  Fly   453 LNSSSAFR-PWGPDTTKAFLHAYG------------ATLSSL------------PYACQEPPELQ 492

Human   475 TPGGLPVPT---YLQPPPQPPSALGCALG-------------ESPALLRQAF------------- 510
            .|..:...|   |.:...||..||.....             |...:.||..             
  Fly   493 NPERVVRSTDKRYAERTYQPNVALAPRKSILSKERDKDRERMEREVMERQRLREKETDHQVVHIK 557

Human   511 ---------------------LDLAEPGGAAGSAEAAPPPGQPPQVVANGP---GSGPPPPAGGA 551
                                 ||:.||...:.|...:|.|...|...|..|   |..||.|....
  Fly   558 QERSQTPTPPTASPPDGVVLPLDVVEPPHPSSSGSNSPLPAHLPAAPATAPPNAGGAPPTPTNLR 622

Human   552 GSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAP--HHPHLLEGRKAG 614
            ..|..  |....|...:.::.::|.....:........||:.|....:.|.  .|..||.     
  Fly   623 NMRSP--EEFSAGGSNEITSSTSPHHQQSSHHQVVQPTAGAPPPSQHIIATVNQHAKLLP----- 680

Human   615 GGSYHHSSAFRPVGGKDDAESLAKLHGASAGAPH-----------------SAQTHPHHHHHPHH 662
                  ||:..|.|  :.:.|||    |:...|.                 |..|..||.|||.|
  Fly   681 ------SSSSLPNG--NGSSSLA----ATNNEPSRIRINKNLMSQQPVVAVSGMTPHHHQHHPTH 733

Human   663 HHHHHH---------PPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHHRGLLS 718
            .||..|         |.|..|..|.|........|..||...|             ..||..:.|
  Fly   734 MHHFSHGYYKSQASSPTQSSSAGLNLSTHSSNVVSSPHHATQP-------------KTHHSSVGS 785

Human   719 -------------------------------PGGTSCCYPSEDSSE------------------- 733
                                           |..::...|.|.:.|                   
  Fly   786 GNHGLQNGKPHLGSEFELSTDTDDTDSLNGEPDSSAMLPPWEQAVESLRETRPKDRERVLLILQR 850

Human   734 --DEDDEE--------------------------------EEQEVDVEGHKPP------------ 752
              .|:|:.                                |||...|:..|.|            
  Fly   851 LLQENDQYRYNNIQLSELLHKQDAHIADLTEQLQRYRRQFEEQVCKVDLRKMPFKHQTRLENVVE 915

Human   753 ----EGEEEEEGRDPDDDEEED-------EETEVLLGDPLVG--------------GG------- 785
                |.||:||   .::||.||       :|...|:..|..|              ||       
  Fly   916 AGRGEAEEDEE---LEEDEMEDRANNNNQQELSPLIKAPANGLRRSVTPPNCCASEGGDCEKPDE 977

Human   786 ------RFLQGRGPSEKGSSRDRAPAVAGAFPLGLNSSRL--LQEDGKLGDPGSDLPPPPPPPLA 842
                  :...|....:|....:.:|:      .|..|..|  |:::....||.::       |.:
  Fly   978 PESKRIKLQVGEKAEDKQVENEESPS------NGTESHDLEKLEKNDDKTDPTNN-------PKS 1029

Human   843 PQKASGGGSSSPGSPVHHPSLEEQPSYKDSQKTKENNQVIVSTKDDNSFSDKNKEHSFFITDSDA 907
            ||         |........:||..  :|..:..|:.:|.|.....::.:......:....||.|
  Fly  1030 PQ---------PSQISSDDEMEEDD--EDEDEEDEDEEVQVEAPHSSALATPPTATTPLSPDSAA 1083

Human   908 SGGDFW-----RERSGEHTQETNSPHSLKKDVENMGKEELQKVLFE------------------- 948
            :.|..:     .:.|.....:.::.|:|:|...|:|.:|..:.|.|                   
  Fly  1084 TAGQLFDSSNSSDESSMKKAQMSACHALEKMSSNVGSDENNQRLAEESQEDEAEEDPEEEDSDDD 1148

Human   949 QIDLRRRLEQEFQ------VLKG---------------------------------NTSFPVFNN 974
            ::.|::|.:|:.|      ||.|                                 .|:.....|
  Fly  1149 EMPLQQRQQQQRQRVAPQNVLSGPSVAGHHPAPAHPPMATKASKKQTPPAPPTAAATTTASATTN 1213

Human   975 FQDQMKRELA 984
            .:.|:|:|:|
  Fly  1214 CELQIKKEIA 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SKOR2NP_001264992.1 DHD_Skor 41..131 CDD:410783 33/89 (37%)
c-SKI_SMAD_bind 144..236 CDD:471667 26/92 (28%)
SnooNP_609164.3 DHD_Ski_Sno 116..206 CDD:410782 33/89 (37%)
c-SKI_SMAD_bind 226..317 CDD:198114 26/99 (26%)
AF-4 637..>789 CDD:461550 40/181 (22%)

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