Protein Alignment Rnf130 and SPBP4H10.07

DIOPT Version :9

• Sequence 1: XP_038942740.1
• Gene: Rnf130 / 652955
• RGDID: 1562041
• Length: 439
• Species: Rattus norvegicus
• Sequence 2: NP_596181.1
• Gene: SPBP4H10.07 / 2541304
• PomBaseID: SPBP4H10.07
• Length: 583
• Species: Schizosaccharomyces pombe
• Alignment Length: 46
• Identity: 19/46 - (41%)
• Similarity: 29/46 - (63%)
• Gaps: 2/46 - (4%)

  Rat   262 DHCAVCIESYKQNDVVRVL-PCKHVFHKSCVDPWL-SEHCTCPMCK 305
            :.|.||:.:::.||..|.| .|.|.||:.|:|.|| |...:||:|:
pombe   523 ERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCR 568

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf130	XP_038942740.1	PA_GRAIL_like	40..179	CDD:239037
		HRD1	<197..366	CDD:227568	19/46 (41%)
		RING-H2_RNF130	262..310	CDD:319717	19/46 (41%)
SPBP4H10.07	NP_596181.1	PHA03328	77..>156	CDD:223046
		zf-rbx1	<522..568	CDD:289448	18/44 (41%)
		RING	525..570	CDD:238093	19/44 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	55	1.000	Domainoid score	I3559
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910