Protein Alignment Rnf130 and SPBC2A9.04c

DIOPT Version :9

• Sequence 1: XP_038942740.1
• Gene: Rnf130 / 652955
• RGDID: 1562041
• Length: 439
• Species: Rattus norvegicus
• Sequence 2: NP_596213.1
• Gene: SPBC2A9.04c / 2540480
• PomBaseID: SPBC2A9.04c
• Length: 741
• Species: Schizosaccharomyces pombe
• Alignment Length: 71
• Identity: 23/71 - (32%)
• Similarity: 36/71 - (50%)
• Gaps: 12/71 - (16%)

  Rat   250 VKKGDKETDPDFD----------HCAVCIESYKQNDVVRV--LPCKHVFHKSCVDPWLSEHCTCP 302
            ||:..||....|:          .|.:|.:...:||..:.  :||.|:|.|:|:..||..|||||
pombe    83 VKRAVKEAWDSFEPLSNDQLMDLTCPICYDDMNENDEKQATKMPCGHIFGKNCLQKWLENHCTCP 147

  Rat   303 MCKLNI 308
            :|:..:
pombe   148 LCRKEV 153

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rnf130	XP_038942740.1	PA_GRAIL_like	40..179	CDD:239037
		HRD1	<197..366	CDD:227568	23/71 (32%)
		RING-H2_RNF130	262..310	CDD:319717	18/59 (31%)
SPBC2A9.04c	NP_596213.1	zf-RING_2	106..150	CDD:290367	17/43 (40%)
		TFIIA	348..>609	CDD:281188

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910