DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A1 and DAT

DIOPT Version :10

Sequence 1:NP_003033.3 Gene:SLC6A1 / 6529 HGNCID:11042 Length:599 Species:Homo sapiens
Sequence 2:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster


Alignment Length:608 Identity:261/608 - (42%)
Similarity:380/608 - (62%) Gaps:55/608 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    11 GQISTEVSEAPVANDKPKTLVVKVQKKAADLPDRDTWKGRFDFLMSCVGYAIGLGNVWRFPYLCG 75
            |.||...:..|..||         ....:|  :|:||.|:.|||:|.:|:|:.|.|||||||||.
  Fly     5 GHISKSKTPTPHDND---------NNSISD--ERETWSGKVDFLLSVIGFAVDLANVWRFPYLCY 58

Human    76 KNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVW-KLAPMFKGVGLAAAVLSFWLNIY 139
            ||||||||:||.:.|:..|:|||.:|.:|||:...|.:..| :|.|:|||:|.|..:::|:::.|
  Fly    59 KNGGGAFLVPYGIMLVVGGIPLFYMELALGQHNRKGAITCWGRLVPLFKGIGYAVVLIAFYVDFY 123

Human   140 YIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRC-------------FSNYS----------MVN 181
            |.|||:|::.:.:.|||.:|||..|:|.|||..|             ..|||          :.|
  Fly   124 YNVIIAWSLRFFFASFTNSLPWTSCNNIWNTPNCRPFESQNASRVPVIGNYSDLYAMGNQSLLYN 188

Human   182 TTNMT----------------SAVVEFWERNMHQM--TDGLDKPGQIRWPLAITLAIAWILVYFC 228
            .|.|.                ||..|::.|.:.::  ::|:...|.|:|.:|:.|.|.:::.||.
  Fly   189 ETYMNGSSLDTSAVGHVEGFQSAASEYFNRYILELNRSEGIHDLGAIKWDMALCLLIVYLICYFS 253

Human   229 IWKGVGWTGKVVYFSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIF 293
            :|||:..:||||:|:|.:||.:|:||..||:||||:..||.:|:||||..:..:|||:|||||:|
  Fly   254 LWKGISTSGKVVWFTALFPYAVLLILLIRGLTLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVF 318

Human   294 FSYGLGLGSLIALGSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVTKRSIADVAA 358
            ||.|.|.|.|:|..|||.:|||||:|:::...|||.||..|||||||::|:|||.....|.|||.
  Fly   319 FSLGPGFGVLLAYASYNKYHNNVYKDALLTSFINSATSFIAGFVIFSVLGYMAHTLGVRIEDVAT 383

Human   359 SGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELF 423
            .||||.|:.||.|:..:|.|..||::||.|||.||:||.|...|..||||.||:|::.|| ||||
  Fly   384 EGPGLVFVVYPAAIATMPASTFWALIFFMMLLTLGLDSSFGGSEAIITALSDEFPKIKRN-RELF 447

Human   424 IAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMV 488
            :|.:..:.:::||::.||||.|.|.|.|.| |:|.|:|..||||.:::||.||.|||.::|::|:
  Fly   448 VAGLFSLYFVVGLASCTQGGFYFFHLLDRY-AAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMI 511

Human   489 GSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGNYVFPKWGQGVGWLMALSSMVLIPGYMA 553
            |..|..:|::||.|..||.:..:.::..:...|||..:||:|.|...:||.:|.||:|:||....
  Fly   512 GFPPGRYWQVCWRFVAPIFLLFITVYGLIGYEPLTYADYVYPSWANALGWCIAGSSVVMIPAVAI 576

Human   554 YMFLTLKGSLKQRIQVMVQPSED 576
            :..|:..|||:||..::..|..|
  Fly   577 FKLLSTPGSLRQRFTILTTPWRD 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A1NP_003033.3 SLC6sbd_GAT1 2..599 CDD:212075 261/608 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 261/608 (43%)
PDZ-binding 597..599
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 252/571 (44%)
Blue background indicates that the domain is not in the aligned region.

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