DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC6A1 and CG31904

DIOPT Version :10

Sequence 1:NP_003033.3 Gene:SLC6A1 / 6529 HGNCID:11042 Length:599 Species:Homo sapiens
Sequence 2:NP_723310.1 Gene:CG31904 / 319016 FlyBaseID:FBgn0260479 Length:403 Species:Drosophila melanogaster


Alignment Length:230 Identity:57/230 - (24%)
Similarity:96/230 - (41%) Gaps:45/230 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    19 EAPVANDKPKTLVVKVQKKAADLPDRDTWKGRFDFLMSCVGYAIG---LGNVWRFPYLCGKNGGG 80
            |.|..:||                .|..|....||..:...:|..   ...:..|..|.|  |..
  Fly    75 ERPYRHDK----------------CRGRWAKSADFYFASCTHAFSSLIFSELSTFGILHG--GWL 121

Human    81 AFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIS 145
            .|:|.|.:.::|..:|:||::..|||::|.|.:..:::||:|||:|.|..:|:.....||.:...
  Fly   122 LFIIAYLMGMLFYSLPIFLIQAFLGQFSSSGTISAFRVAPIFKGIGYAILLLNLGTLTYYSIAAV 186

Human   146 WAIYYLYNSFTTTLPWKQCDNPWNTDRC--FSNY----------SMVNTTNMTSAVVEFWERNM- 197
            ..:.|..||....:||..|:|.|||..|  ..||          ::.....:.|:|:....:.. 
  Fly   187 VPLIYTVNSIHPVIPWMSCNNSWNTQECSLHENYDVDFAVAVIFTLALAMGVQSSVIPLLSQVAG 251

Human   198 HQMT-DGLDKPGQI---------RWPLAITLAIAW 222
            |.:: ..:..|..:         .||.|:.:| :|
  Fly   252 HGLSYTAVSGPAVVASPWAVPAAHWPAAVNVA-SW 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A1NP_003033.3 SLC6sbd_GAT1 2..599 CDD:212075 57/230 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599
PDZ-binding 597..599
CG31904NP_723310.1 SLC5-6-like_sbd 123..>243 CDD:444915 36/119 (30%)
Cuticle_4 276..344 CDD:464954 5/11 (45%)
Blue background indicates that the domain is not in the aligned region.

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