DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC6A1 and CG10804

DIOPT Version :10

Sequence 1:NP_003033.3 Gene:SLC6A1 / 6529 HGNCID:11042 Length:599 Species:Homo sapiens
Sequence 2:NP_001138150.1 Gene:CG10804 / 31317 FlyBaseID:FBgn0029663 Length:726 Species:Drosophila melanogaster


Alignment Length:609 Identity:239/609 - (39%)
Similarity:351/609 - (57%) Gaps:73/609 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     2 ATNGSKVADG-QISTEVSEAP------VANDKPKTLVVKVQKKAADLPD----------RDTWKG 49
            |||...::|. ..|:|:.:.|      .:..|.|..:|.:...:||..|          |::|..
  Fly    59 ATNQGFMSDAFDESSELEQDPPPFGSEASTSKAKAELVAIATASADQQDIVEGEKEGEERESWDS 123

Human    50 RFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLG 114
            :..||::.:|||:|||||||||||..||||||||:|||:.|...|:|:|.||.::||....|.:|
  Fly   124 KIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVPYFIMLCIQGIPIFYLELAIGQRLRKGAIG 188

Human   115 VW-KLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWNTDRCFSNYS 178
            || :::|...|:|:::||:|:.:.:||..||:|.:.||.:||.:.|||..|..     |.:.|::
  Fly   189 VWSQVSPYLGGIGISSAVVSYIVALYYNTIIAWCLIYLLHSFESPLPWADCPT-----RLYKNFT 248

Human   179 MVNTTN-MTSAVVEF-WERNMHQMTDGLDKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVY 241
            ..:... :.|:..:| |.|...|.::.:|.|....:.:||.|.::|.|||.|:.:|:..:||:||
  Fly   249 YDHEPECVASSPTQFYWYRTTLQCSESVDMPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVY 313

Human   242 FSATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIAL 306
            .:|.:||::|||.||||:||.||.:|:....||.:..|.|..|||:|.||||||.||..|.|||.
  Fly   314 MTAIFPYVVLIIFFFRGITLKGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAF 378

Human   307 GSYNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHVT------KRS------------I 353
            .|||..:||.|||:|:|...|..||||||.|:||::||.|..|      :|:            :
  Fly   379 SSYNPANNNCYRDAILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLVAQNKTHNLPV 443

Human   354 ADV------AASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDE- 411
            .|:      :|||.||||:.:.||:.|.|.:.|||:|||.||..|||||||.|:||.:|:|||. 
  Fly   444 CDLQTELANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDMK 508

Human   412 -YPRLLRNRRELFIAAVCIISYLIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFY 475
             :|.|   .:|..:.|:|.....|.:......|.|:|:|.|.: |....||.:..|||:|||:.|
  Fly   509 LFPNL---PKEYIVGALCFSCCTISMCFANGAGSYIFQLMDSF-AGNFPLLIIALFECLSISYIY 569

Human   476 GVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGNYVFPKW------GQ 534
            ||.||.|:|:.|.||||..:|..||.:.:|..:..:.:.|..|:  ||.|: .:|.|      .:
  Fly   570 GVRRFSDDIEMMTGSRPNFYWMFCWKYLSPCAMVTILLASFYQL--LTEGS-SYPAWIGSKGATE 631

Human   535 GVGW---------LMALSSMVLIP 549
            |:.|         .:.|||::.||
  Fly   632 GMEWPHWCIVVAFFLILSSILWIP 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC6A1NP_003033.3 SLC6sbd_GAT1 2..599 CDD:212075 239/609 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599
PDZ-binding 597..599
CG10804NP_001138150.1 SLC6sbd-B0AT-like 120..661 CDD:271364 225/548 (41%)
Blue background indicates that the domain is not in the aligned region.

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