DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC5A4 and CG5687

DIOPT Version :9

Sequence 1:XP_016884409.1 Gene:SLC5A4 / 6527 HGNCID:11039 Length:689 Species:Homo sapiens
Sequence 2:NP_001286910.1 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster


Alignment Length:555 Identity:126/555 - (22%)
Similarity:231/555 - (41%) Gaps:124/555 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    83 GTIGGFFLAGRDMAWWPMGASLFASNIGSNHYVGLAGTGAASGVATVTFEWTSSVMLLI------ 141
            |:....||.|.:|:.:|:..||..|.|.:...:|        ..:.:.|:.|..|:::|      
  Fly   125 GSSSNEFLLGSEMSIFPVTLSLTTSFITAIELLG--------NPSEMYFQGTQFVLIVIPMVIVI 181

Human   142 --LGWIFVPIYIKSGVMTMPEYLKKRFGGERLQVYLSILSLFICVVLL---ISADIFAGAIFIKL 201
              ...||.|||.|..:.:..|||..|||.|     :.||...:.|:.:   .:..:.|.||.:..
  Fly   182 PVAVKIFYPIYFKMELTSCYEYLGIRFGKE-----IRILGAVLYVIQMCFYTAVAVLAPAIALSK 241

Human   202 ALGLDLYLAIFILLAMTAVYTTTGGLASVIYTDTLQTIIMLIGSFILMGFAFNEVGGYESFTEKY 266
            |.|||..:|:.::..:...|::.||:.:|:..|:.|..::.:...:::|     :|.:.|     
  Fly   242 ATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIADSFQAAVLAVSLVLIVG-----LGCFYS----- 296

Human   267 VNATPSVVEGDNLTI--SASCYTPRADSFHIFRDAVTGDIPWPGIIFGMPITALWYW----CTNQ 325
                     |:.:.:  :||.:. |.:.|::..|..|....|..:|.|     .:||    ||||
  Fly   297 ---------GNPIQVFQTASDHN-RLEFFNMDPDPTTRHTVWSVVIGG-----FFYWTSLFCTNQ 346

Human   326 VIVQRCLCGKDMSHVKAACIMCAYLKLLPMFLMVMPGMISRILYTDMVACVVPSECVKHCGVDVG 390
            ..||:|:..|.:...|.| :..|.:.|:.:||:        ..||.::.....::|.......:.
  Fly   347 ASVQKCMSLKSLRLAKIA-LGFAIIGLIVVFLL--------NFYTGLMVFTHYADCDPLTAGRIS 402

Human   391 CTNYAYPTMVLELMP--QGLRGLMLSVMLASLMSSLTSIFNSASTLFTIDLYTKMR--KQASEKE 451
            .|:...|..|:....  ..:.|:.::.:.|:.:.::.|..||.|.:...||.....  |.:.||.
  Fly   403 ATDQLLPYYVINTYEHISSVAGIFVAGIFAASLGTVASALNSLSAVTCEDLLVNGMNIKISPEKG 467

Human   452 LLIA------------GRIFVLLLTVVSIVWVPLVQVSQNGQLIHYTESISSYLGPPIAAVFVLA 504
            ...|            |.:|:               |...|.::..|.:::..:|.....:|||.
  Fly   468 ATYAKWMSLGFGIASFGLVFI---------------VEHLGGVLQATLTLNGLIGGVTLGLFVLG 517

Human   505 IFCKRVNEQGAFWGLMVGLAM----GLIRMITEFAYGTGSCLAPSNCPKIICGVHYLYFSIVLFF 565
            |.||:.|.:|||:|.::.||:    |::..|.......    .|::..|..|.|           
  Fly   518 IACKQANTKGAFYGGLLSLALVIFVGVVAQIVSVEQPA----LPTSIDKCDCHV----------- 567

Human   566 GSMLVTLGISLLTKPIPDVH--------LYRLCWV 592
             :|...:| ||||:|:..:.        ::||.::
  Fly   568 -NMTNIIG-SLLTEPLEVIEEGGFTSWPIFRLSYM 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A4XP_016884409.1 None
CG5687NP_001286910.1 SLC5sbd_NIS-SMVT 99..620 CDD:271383 126/555 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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