DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC5A3 and CG5687

DIOPT Version :9

Sequence 1:NP_008864.4 Gene:SLC5A3 / 6526 HGNCID:11038 Length:718 Species:Homo sapiens
Sequence 2:NP_001286910.1 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster


Alignment Length:559 Identity:133/559 - (23%)
Similarity:229/559 - (40%) Gaps:96/559 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     2 RAVLDTADIAIVALYFILVMCIGFFAMWKSNRSTVSGYFLAGRSMTWVAIGASLFVSNIGSEHFI 66
            :|.....|..|:....::.:.||.|..:.....:.|..||.|..|:...:..||..|.|.:...:
  Fly    93 KATFSGYDYVILLGMLVISLGIGIFYGFFQKGGSSSNEFLLGSEMSIFPVTLSLTTSFITAIELL 157

Human    67 GLAGSGAASGFAVGAWEFNALLLLQLLGWVFIPIYIRSGVYTMPEYLSKRFGGHRIQVYFAALSL 131
            |........|..........::::.:...:|.|||.:..:.:..|||..|| |..|::..|.|.:
  Fly   158 GNPSEMYFQGTQFVLIVIPMVIVIPVAVKIFYPIYFKMELTSCYEYLGIRF-GKEIRILGAVLYV 221

Human   132 ILYIFTKLSVDLYSGALFIQESLGWNLYVSVILLIGMTALLTVTGGLVAVIYTDTLQALLMIIGA 196
            |...| ..:|.:.:.|:.:.::.|.:..::|:|:..:....:..||:.||:..|:.||     ..
  Fly   222 IQMCF-YTAVAVLAPAIALSKATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIADSFQA-----AV 280

Human   197 LTLMIISIMEIGGFEEVKRRYMLASPDVTSILLTYNLSNTNSCNVSPKKEALKMLRNPTDEDVPW 261
            |.:.::.|:.:|.|..       .:|    |.:....|:.|      :.|...|..:||.....|
  Fly   281 LAVSLVLIVGLGCFYS-------GNP----IQVFQTASDHN------RLEFFNMDPDPTTRHTVW 328

Human   262 PGFILGQTPASVWYW----CADQVIVQRVLAAKNIAHAKGSTLMAGF--LKLLPMFII-VVPGMI 319
            ...|.|     .:||    |.:|..||:.::.|::..||   :..||  :.|:.:|:: ...|: 
  Fly   329 SVVIGG-----FFYWTSLFCTNQASVQKCMSLKSLRLAK---IALGFAIIGLIVVFLLNFYTGL- 384

Human   320 SRILFTDDIACINPEHCMLVCGSRAGCSNIAYPRLVMKLVP--VGLRGLMMAVMIAALMSDLDSI 382
              ::||....| :|    |..| |...::...|..|:....  ..:.|:.:|.:.||.:..:.|.
  Fly   385 --MVFTHYADC-DP----LTAG-RISATDQLLPYYVINTYEHISSVAGIFVAGIFAASLGTVASA 441

Human   383 FNSASTIFTLDVYKLI---------RKSASSRELMIVGRIFVAFMVVISIAWVPIIVEMQGG--Q 436
            .||.|.:...|:  |:         .|.|:..:.|.:|....:|.:|       .|||..||  |
  Fly   442 LNSLSAVTCEDL--LVNGMNIKISPEKGATYAKWMSLGFGIASFGLV-------FIVEHLGGVLQ 497

Human   437 MYLYIQEVADYLTPPVAALFLLAIFWKRCNEQGAFYGGMAGFVL----GAVRLILAFAYRAPECD 497
            ..|.:..:...:|   ..||:|.|..|:.|.:||||||:....|    |.|..|::       .:
  Fly   498 ATLTLNGLIGGVT---LGLFVLGIACKQANTKGAFYGGLLSLALVIFVGVVAQIVS-------VE 552

Human   498 QPDNRPGFIK-DIHYMYVATGLFWVTGLITVIVSLLTPP 535
            ||.......| |.|           ..:..:|.||||.|
  Fly   553 QPALPTSIDKCDCH-----------VNMTNIIGSLLTEP 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A3NP_008864.4 SLC5sbd_SMIT 9..718 CDD:271382 132/552 (24%)
CG5687NP_001286910.1 SLC5sbd_NIS-SMVT 99..620 CDD:271383 132/553 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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