DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SMTN and CG13366

DIOPT Version :9

Sequence 1:NP_001369571.1 Gene:SMTN / 6525 HGNCID:11126 Length:1009 Species:Homo sapiens
Sequence 2:NP_001036254.1 Gene:CG13366 / 31004 FlyBaseID:FBgn0025633 Length:1094 Species:Drosophila melanogaster


Alignment Length:1051 Identity:227/1051 - (21%)
Similarity:382/1051 - (36%) Gaps:271/1051 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    69 FSELVTGATGTGDLTRKEPTELGASEMADEALAGLDEGALRKLLEVTADLAERRRIRSAIRELQR 133
            :.:|...||.|...|...    |::..||..::.....|....:...|       ..|..::.|:
  Fly   188 YQQLAAAATATATATSAN----GSNTSADSPVSSFPAAAAAVAVAAVA-------ASSYQQQQQQ 241

Human   134 QEL---EREEEALASKRFRAERQDNKENWLHSQQREAEQR--------AALARLAGQLESMNDVE 187
            |:|   |::::.|.....:.:....:.....|:|.:.|.|        :.:|:|.|.|..|..::
  Fly   242 QQLLNNEQQQQQLLEANNKMQELHKQMERFRSEQMQLETRITELLPYQSEVAKLKGDLVKMQSLQ 306

Human   188 ELTALLRSAGEYEERKLIRAAIRRV------RAQEIEAATLAGRLYSGRPNS---GSREDSKGLA 243
            |.:.:.....:||...| |..:|.|      .|::.:....:.||:|..|.|   .|..|     
  Fly   307 EKSQMEIGNLKYENESL-RNRLRDVVNSPLSDAEKHQIIQDSQRLHSSAPASIALPSTHD----- 365

Human   244 AHRLEQCEVPEREEQEQQAEVS---------KPTPTPEGTSQDVTTVTLLLRAPPGSTSSSPASP 299
            ||....|..|:.::|...:|:|         :...|...|::::.           :|....|..
  Fly   366 AHDGTPCLTPDWDKQSSSSEISVACLQDKIIQMEETHYSTNEELQ-----------ATLQELADL 419

Human   300 SSSPTPASPE-------------------PPLEPAEAQCLT-AEVPGSPEPPPSPPKTTSPEPQE 344
            .:..|....|                   ..|..:..|..| .|:.......|:|..:.|...|:
  Fly   420 QTQLTDTQTENERLAEEKDVLFQSLCRQTEKLNESRTQISTLQELLLRDTKQPAPEVSASEREQK 484

Human   345 SPTLPSTEGQVVNKLLSGPKETPAAQSPTRGPSDTKRADVAGPRPCQRS---LSVLSPRQPAQNR 406
            ...|..|..:....:|...:|..|..      ::.|:|..||....||.   :::|..:..|.|.
  Fly   485 LLDLIKTSQEEREAVLLKQEELGAEL------AEMKQAREAGQLELQRQRERIALLDSQLDAANA 543

Human   407 ESTPLASGPSSFQRAGSVRDRVHKFTSDSPMAARLQDGTPQAALSPLTPARLLGPSLTSTTPASS 471
            |.   ..|.:.|.:|      :.:.:..:...:||.        :.|..||    |......|..
  Fly   544 ER---RQGEAQFSQA------MEEISQRAIEISRLS--------TLLENAR----SKIEELEADL 587

Human   472 SSGSSSRGPSDTSSRFSKEQRGVAQPLAQLR-SCPQEEGPRGR------GLA--ARPLENRAGGP 527
            |.|..: ..|:......||:..:.:.:|:|: .|.:.:....|      ||.  .:.::|.|...
  Fly   588 SRGDKT-DLSEVLDVARKEKDALEERVAELQDQCSRSQAELRRLRDQLSGLTEECKVVKNNAKCA 651

Human   528 VARSEEPGAPLPVAVGTAEPGGSMKTTFTIE----IKD---GRGQASTGRVLLPTGNQRAELTLG 585
            |:..|                      :.:|    .||   |..||...||        |||.:.
  Fly   652 VSHLE----------------------YRLEQLQRDKDKIAGEWQALEERV--------AELQVQ 686

Human   586 LRAPPTLLSTSSGGKSTITRVNSPGTLARLGSVTHVTSFSHAPPSSRGGCSIKMEAEPAEPLAAA 650
            .:.       ....|:.:..:.:. |...||.|          ....|....:::.|        
  Fly   687 CKC-------HQEDKAQLQSLLAE-TQRHLGDV----------QLKLGEAECRLDQE-------- 725

Human   651 VEAANGAEQTRVNKAPEGRSPLSAEELMTI------EDEGVLDK---MLDQSTDFEERKLIRAAL 706
                   .|.|..:|.|.:. ..|:.|||:      :.|.:..:   :||..|..|:.:|:...|
  Fly   726 -------TQLRRKEAEEWQQ-FQADLLMTVRVANDFKTEALSAREQLVLDNKTQKEKIRLLEQQL 782

Human   707 RELRQRKRDQRDK--------ERERRLQEARGRPGEGRGNTATETTT-------RHSQRAADGSA 756
            .:|.:::..|.:.        :||..:...|.:....|.::.....|       ..:|..||.|.
  Fly   783 EKLTKQQMQQSETPQSVLSTVQREMEMATRRSKLSFSRQDSRLSVKTLIESIENNKAQGKADESE 847

Human   757 VSTVTKTERLVHSNDGTRTARTTTV----ESSF-------VRRSEN---------GSGSTMMQTK 801
             |..:.|..|   |.||....||.:    .|.:       |.:|.|         |:|   ..|.
  Fly   848 -SHYSSTSSL---NSGTPDLGTTPIIFPPSSDWHESIRLPVLQSTNLHVNVGNEVGAG---QGTN 905

Human   802 TFSSSSSSKKMGSIFDREDQASPRAGSLAALEKRQAEKKKELMKAQ--SLPKTSASQARKAMIEK 864
            |.|.|..           |.||....:|...:::|........:.|  |.|.|.|:.:       
  Fly   906 TSSGSGG-----------DLASTTKATLPLRDQQQLAITSTQSQVQNVSQPSTPATPS------- 952

Human   865 LEKEGAAGSPGGPRAAVQRSTSFG---------VPNANSIKQMLLDWCRAKTRGYEHVDIQNFSS 920
              ..|::.|.|.|...|.:|...|         ..|..|.:..||.||:.||.||.::||.||||
  Fly   953 --SAGSSSSGGLPFGNVSKSFISGERKDPLNMLAKNGGSKRNALLKWCQNKTVGYRNIDITNFSS 1015

Human   921 SWSDGMAFCALVHNFFPEAFDYGQLSPQNRRQNFEVAFSSAETHADCPQLLDTEDMVRLREPDWK 985
            ||:||:||||::|::.|:...|.||:|.|:|:||.:||::||: ......|:..||.::..|||.
  Fly  1016 SWNDGLAFCAILHSYLPDRIPYDQLTPANKRRNFSLAFAAAES-VGIGTTLNINDMCQIERPDWM 1079

Human   986 CVYTYIQEFYR 996
            .|.:|:...|:
  Fly  1080 QVMSYVTAVYK 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMTNNP_001369571.1 Smoothelin 86..128 CDD:403640 6/41 (15%)
Smoothelin 167..216 CDD:403640 15/62 (24%)
Smoothelin 664..713 CDD:403640 14/57 (25%)
CH_SMTNB 894..1005 CDD:409108 46/103 (45%)
CG13366NP_001036254.1 Ead_Ea22 554..684 CDD:290646 33/178 (19%)
CH 992..1092 CDD:237981 45/100 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4678
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
32.770

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