DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppp5c and rdgC

DIOPT Version :10

Sequence 1:NP_113917.1 Gene:Ppp5c / 65179 RGDID:68415 Length:499 Species:Rattus norvegicus
Sequence 2:NP_536738.3 Gene:rdgC / 40224 FlyBaseID:FBgn0265959 Length:746 Species:Drosophila melanogaster


Alignment Length:513 Identity:162/513 - (31%)
Similarity:245/513 - (47%) Gaps:94/513 - (18%)


- Green bases have known domain annotations that are detailed below.


  Rat    31 LKTQANDYFKAKDYENAIKFYSQAIE--------LNP-----SNAIYYGNRSLAYL--------- 73
            |:|..:...::...|:|....|..||        |.|     |:|.....|:.:.|         
  Fly     8 LRTDDDGKRRSSSVEDASSCRSSEIERVGASMQTLGPNGQPQSSAAQTSTRASSLLQLFQRRGWC 72

  Rat    74 ---RTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGK------FR----AALRD------- 118
               |....|.:...|.:.|.. ..:|:.:|||..:...:.:      |:    |:.:|       
  Fly    73 KHFRKPLRGMSASRAEKTIRA-AIFIQKWYRRHQARREMQRRCNWQIFQNLEYASEQDQAELYKF 136

  Rat   119 YETVVKVKPNDKDAKMKYQECSKIVKQKAFERAIAGDEHRRSVVDSLDIESMTIEDEYSGPKLED 183
            :..::|..|.....|.:||                |..| .||:|..|    .:.:|:.  .:.:
  Fly   137 FNDLIKHMPQAAGRKNQYQ----------------GSAH-VSVLDDKD----DLVEEFG--DIVN 178

  Rat   184 GKVTITFMKD----LMQWYKDQK--KLHRKCAYQILVQVKEVLCKLSTLVETTLKETEKITVCGD 242
            .|:.:...|:    |:..::.::  :||.|....||.:..:.|.:|..:...:...::::|||||
  Fly   179 AKIELPIRKNHIDLLIDVFRKKRGNRLHPKYVALILREAAKSLKQLPNISPVSTAVSQQVTVCGD 243

  Rat   243 THGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETD 307
            .||:..|||.:...|||||.:|||:|||||||||...:||:|.|....|.:|:...|.|||||..
  Fly   244 LHGKLDDLLVVLHKNGLPSSSNPYVFNGDFVDRGKRGLEVLLLLLSLYLAFPNAVFLNRGNHEDS 308

  Rat   308 NMNQIYGFEGEVKAKYT---AQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKI 369
            .||..|||..||::||.   .::.....||:.||||...:|.:|||:||| || |..:||.|:.|
  Fly   309 VMNARYGFIREVESKYPRNHKRILAFIDEVYRWLPLGSVLNSRVLIVHGG-FS-DSTSLDLIKSI 371

  Rat   370 ERNR-----QPP--DSGPM--------CDLLWSDPQPQNGRSVSK-RGVSCQFGPDVTKAFLEEN 418
            :|.:     :||  |..|:        .|::|||||...|...:. ||....||||||..||:.:
  Fly   372 DRGKYVSILRPPLTDGEPLDKTEWQQIFDIMWSDPQATMGCVPNTLRGAGVWFGPDVTDNFLQRH 436

  Rat   419 QLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQF 476
            :|.|:|||||.|..|:|..|..:.:|:|||.||.....||.:||.| .:.|.|.|.|:
  Fly   437 RLSYVIRSHECKPNGHEFMHDNKIITIFSASNYYAIGSNKGAYIRL-NNQLMPHFVQY 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppp5cNP_113917.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
NlpI <19..>129 CDD:443815 26/139 (19%)
TPR 1 28..61 9/42 (21%)
TPR repeat 28..56 CDD:276809 5/24 (21%)
TPR repeat 61..91 CDD:276809 7/41 (17%)
TPR 2 62..95 7/44 (16%)
TPR 3 96..129 9/49 (18%)
TPR repeat 96..124 CDD:276809 7/44 (16%)
MPP_PP5_C 176..491 CDD:277362 126/326 (39%)
Catalytic 200..499 123/298 (41%)
Required for autoinhibition. /evidence=ECO:0000269|PubMed:11523989 495..499
rdgCNP_536738.3 IQ 89..111 CDD:197470 5/22 (23%)
MPP_RdgC 184..494 CDD:277364 125/313 (40%)
FRQ1 527..681 CDD:444056
EFh 616..681 CDD:238008
Blue background indicates that the domain is not in the aligned region.

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