DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC1A3 and slc1a3

DIOPT Version :10

Sequence 1:NP_001425387.1 Gene:SLC1A3 / 6507 HGNCID:10941 Length:589 Species:Homo sapiens
Sequence 2:NP_001106687.1 Gene:slc1a3 / 100127700 XenbaseID:XB-GENE-975313 Length:542 Species:Xenopus tropicalis


Alignment Length:589 Identity:470/589 - (79%)
Similarity:512/589 - (86%) Gaps:47/589 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTKSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTILG 65
            |||||||:|:.|.||||||:|||:|:|.||||:|||||:|||.:|.||.|||.||.|||:|.|||
 Frog     1 MTKSNGEDPRSGNRMERFQEGVRQRSLKAKKKMQNITKDDVKGFLKRNGFVLFTVFAVIIGIILG 65

Human    66 FTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYMTT 130
            |::|.|.|::||:||||||||||||||||||||||:|||||||||||||||||||:|||||||||
 Frog    66 FSVRKYHMTFREIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMAALDSKASGKMGIRAVVYYMTT 130

Human   131 TIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYE 195
            |:|||.||||||||||||||:||.|||||||.:|||||||:||||||||||:|||||||||||||
 Frog   131 TVIAVFIGIIIVIIIHPGKGSKEKMHREGKIEQVTAADAFMDLIRNMFPPNMVEACFKQFKTNYE 195

Human   196 KRSFKVPIQANETLVGAVINNVSEAMETLTRITEELVPVPGSVNGVNALGLVVFSMCFGFVIGNM 260
            |:.|:|||..||:|:.:|.|||||||||||:..||:|||.|||||||||||||||||||.|||||
 Frog   196 KKQFRVPIPENESLLSSVANNVSEAMETLTKFREEIVPVAGSVNGVNALGLVVFSMCFGLVIGNM 260

Human   261 KEQGQALREFFDSLNEAIMRLVAVIMWSKRKTLCPRAILSEGKARFCKNQGKFIFTKEKKEVHSF 325
            ||||:||::||||||||||||||||||                                      
 Frog   261 KEQGKALKDFFDSLNEAIMRLVAVIMW-------------------------------------- 287

Human   326 CKKRSPQFLYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRK 390
                     |||:||||||||||.|||||||:||||.|||:||||||||||:.||||||||||||
 Frog   288 ---------YAPIGILFLIAGKIAEMEDMGVVGGQLGMYTITVIVGLLIHAIFVLPLLYFLVTRK 343

Human   391 NPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEAL 455
            |||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   344 NPWVFIGGLIQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEAL 408

Human   456 AAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDW 520
            ||||||||||::||||||||||||||||||||||||||||||||||||||||||:||||||||||
 Frog   409 AAIFIAQVNNYDLNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDW 473

Human   521 FLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQDNETEKPIDS 585
            ||||||||||||||||||||||||||||||..|.|||||||||||||||||||:|:||.|||:||
 Frog   474 FLDRLRTTTNVLGDSLGAGIVEHLSRHELKRGDAEMGNSVIEENEMKKPYQLISQENEAEKPLDS 538

Human   586 ETKM 589
            ||||
 Frog   539 ETKM 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC1A3NP_001425387.1 None
slc1a3NP_001106687.1 GltP 46..496 CDD:440912 396/496 (80%)

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