DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC1A2 and Eaat1

DIOPT Version :9

Sequence 1:XP_016873625.1 Gene:SLC1A2 / 6506 HGNCID:10940 Length:579 Species:Homo sapiens
Sequence 2:NP_001369123.1 Gene:Eaat1 / 34251 FlyBaseID:FBgn0026439 Length:523 Species:Drosophila melanogaster


Alignment Length:534 Identity:213/534 - (39%)
Similarity:320/534 - (59%) Gaps:50/534 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    48 KNLLLTLTVFGVILGAVCGGLLRLAS-PIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLS 111
            :|:|...||.||.:|.:.|.:::.:: ......:|.|:|||:|.:||||.||:||::||:.:.:.
  Fly    17 ENVLTMATVIGVFVGGLIGFIIKNSTGEWSKREIMYISFPGEIFLRMLKCLIVPLLVSSITSAIG 81

Human   112 GLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPK--LKKQLGPGKKNDEVSSLDAFL 174
            |||...|.::.|||:.||..|||.|.:||:.||..:.||...  ::.|.....|..:|.:.|..:
  Fly    82 GLDLSMSSKIATRAITYYFVTTISAVILGICLVTTLRPGQGAKIVETQTESIDKASKVLTPDTLM 146

Human   175 DLIRNLFPENLVQA-CFQQIQTVTKKVLVAPPPDEEANATSAVVSLLNETVTEVPEETKMVIKKG 238
            ||:||:|.:|::|: .||....:.:...::|....|                            .
  Fly   147 DLVRNMFTDNIIQSTMFQHRTEIYENTSISPAQPME----------------------------N 183

Human   239 LEFK----DGMNVLGLIGFFIAFGIAMGKMGDQAKLMVDFFNILNEIVMKLVIMIMWYSPLGIAC 299
            .|||    :|.|||||:.|.:..|..:|:|.::.:|:.|||..|:|.:|.:...::|.||||:|.
  Fly   184 WEFKSAQREGSNVLGLVMFSVILGTTIGRMREKGQLLQDFFTTLSEAMMTITSWVIWISPLGVAF 248

Human   300 LICGKIIAIKDLEVVARQLGMYMVTVIIGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITAL 364
            ||..|||.::.:....:.||.|.:||:|||.:||...:.:|:|:.||:.|:.:.|.:.|...||.
  Fly   249 LIAAKIIEMESIAATIQSLGWYFITVMIGLFLHGFGTIAVIFFLGTRRLPYRYIAKLSQVLATAF 313

Human   365 GTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVVLDGGQ 429
            ||.||:.|:|:|.:|| :|:|||.||||||:|||||||||||||||||||:||||...:....|.
  Fly   314 GTGSSSATMPLTIKCL-DNMGIDPRVTRFVIPVGATINMDGTALYEAVAALFIAQYREMSYSFGT 377

Human   430 IVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTSVNVVGDSFG 494
            ||.||:|||.||:|||.||.||||||:::|..|||..:|:||::||||||||.||::||:.|:.|
  Fly   378 IVAVSITATAASIGAAGIPQAGLVTMVMVLDTVGLEPKDVSLIIAVDWLLDRFRTTINVMCDALG 442

Human   495 AGIVYHLSKSELDTIDSQH-RVHEDIEMTKTQSIYDDMKNHRESNSNQCVYAAHNSVIVD----- 553
            ..:|.||||::|.::|..: ..||.:|:....   .:||. |:|:    :.|.:... ||     
  Fly   443 TILVNHLSKNDLASVDRLNAEPHELLELGPNG---HEMKEXRQSS----LGAYNRKRXVDMSRLW 500

Human   554 ECKVTLAANGKSAD 567
            .|...|.:|...:|
  Fly   501 ACFHILPSNDSDSD 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC1A2XP_016873625.1 None
Eaat1NP_001369123.1 SDF 20..449 CDD:395299 192/457 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm41925
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.730

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