DRSC/TRiP Functional Genomics Resources

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Protein Alignment REEP1 and CG5539

DIOPT Version :10

Sequence 1:NP_001358208.1 Gene:REEP1 / 65055 HGNCID:25786 Length:284 Species:Homo sapiens
Sequence 2:NP_611831.2 Gene:CG5539 / 37766 FlyBaseID:FBgn0034907 Length:296 Species:Drosophila melanogaster


Alignment Length:290 Identity:70/290 - (24%)
Similarity:117/290 - (40%) Gaps:59/290 - (20%)


- Green bases have known domain annotations that are detailed below.


Human     5 IISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLCWFPFYYELK 69
            ::|:.:..::||:.||:.:||.:.|.| :|::.|..|||::|...|.|...|:||.|.|.|...|
  Fly     6 LVSQFLFFVYGTMGPAWQTYKTLNSGD-EEFLAWAKYWIVYAFLVTFEVLADVFLSWLPLYMPTK 69

Human    70 IAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDR-SYDALVHFGKRGLNVAATAA 133
            :..|.|::......:..::...:.|.|:.:::|||..|.:.|:: ..|||....:.......:..
  Fly    70 LLLVVWIVLSAPAANVWIFDAILRPVLAKRQEEIDHFLHRGKEKLLIDALASMTQLVAQTQISVL 134

Human   134 VMAASKGQGALSERLR-SFSMQDLTTIRGDGAPAPSGPPPPGSGRASGKHGQPKMSRSASESASS 197
            ...:|....:.:..|| |..:||.|   |:|.          .||.|.......:|.....|.||
  Fly   135 PFVSSFWSRSSTAPLRTSDLLQDST---GEGI----------GGRTSEDTDSANVSVQNLSSGSS 186

Human   198 SVCTCCSTCRTWKVVEGDVNEGGMKAWEPHQVQNPLAFSDDEEEDLLDFMYKYKAPRRMELP--- 259
            .|                   |.::    |       ..||.||.|:...   ||...::..   
  Fly   187 PV-------------------GSLE----H-------LRDDSEELLVGVS---KATTHLQAEQFQ 218

Human   260 ---LEAPPRILRSR----FRKKSTSSSATE 282
               ....|||:..|    |:.....:|||:
  Fly   219 SDVSSESPRIINRRPQRKFKNAIAIASATK 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
REEP1NP_001358208.1 TB2_DP1_HVA22 19..94 CDD:460820 23/74 (31%)
CG5539NP_611831.2 TB2_DP1_HVA22 20..94 CDD:460820 23/74 (31%)

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