DRSC/TRiP Functional Genomics Resources

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Protein Alignment PINK1 and Pink1

DIOPT Version :9

Sequence 1:NP_115785.1 Gene:PINK1 / 65018 HGNCID:14581 Length:581 Species:Homo sapiens
Sequence 2:XP_036020293.1 Gene:Pink1 / 68943 MGIID:1916193 Length:592 Species:Mus musculus


Alignment Length:592 Identity:473/592 - (79%)
Similarity:508/592 - (85%) Gaps:13/592 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAVRQALGRGLQLGRALLLRFTGKPGRAYGLGRPGPAAGCVRGERPGWAAGPGAEPRRVGLGLPN 65
            |||||||||||||||||||||..|||..:|.|:|||||...||||||....|||:||.|||.||:
Mouse     1 MAVRQALGRGLQLGRALLLRFAPKPGPLFGWGKPGPAAAWGRGERPGQVVSPGAQPRPVGLPLPD 65

Human    66 RLRFFRQSVAGLAARLQRQFVVRAWGCAGPCGRAVFLAFGLGLGLIEEKQAESRRAVSACQEIQA 130
            |.|||||||||||||:||||:|||.|.|||||||||||||||||||||||||.|||.||||||||
Mouse    66 RYRFFRQSVAGLAARIQRQFMVRARGGAGPCGRAVFLAFGLGLGLIEEKQAEGRRAASACQEIQA 130

Human   131 IFTQKSKPGPDPLDTRRLQGFRLEEYLIGQSIGKGCSAAVYEATMPTLPQNLEVTKSTGLLPGRG 195
            |||||:|...||||||..||||||:|||||:|||||:|||||||||||||:||..|..||: |:|
Mouse   131 IFTQKTKRVSDPLDTRCWQGFRLEDYLIGQAIGKGCNAAVYEATMPTLPQHLEKAKHLGLI-GKG 194

Human   196 PGTSAPGEGQERAPGAPAFPLAIKMMWNISAGSSSEAILNTMSQELVPASRVALAGEYGAVTYRK 260
            |.....|...|:|||.|.||.||||||||||||||||||:.|||||||||||||||||||||||:
Mouse   195 PDVVLKGADGEQAPGTPTFPFAIKMMWNISAGSSSEAILSKMSQELVPASRVALAGEYGAVTYRR 259

Human   261 SKRGPKQLAPHPNIIRVLRAFTSSVPLLPGALVDYPDVLPSRLHPEGLGHGRTLFLVMKNYPCTL 325
            |:.||||||||||||||.||||||||||||||.||||:||...:|||||||||||||||||||||
Mouse   260 SRDGPKQLAPHPNIIRVFRAFTSSVPLLPGALADYPDMLPPHYYPEGLGHGRTLFLVMKNYPCTL 324

Human   326 RQYLCVNTPSPRLAAMMLLQLLEGVDHLVQQGIAHRDLKSDNILVELDP------------DGCP 378
            ||||...|||.|||.||.||||||||||||||||||||||||||||.|.            ||||
Mouse   325 RQYLEEQTPSSRLATMMTLQLLEGVDHLVQQGIAHRDLKSDNILVEWDSALLQERTPLHLMDGCP 389

Human   379 WLVIADFGCCLADESIGLQLPFSSWYVDRGGNGCLMAPEVSTARPGPRAVIDYSKADAWAVGAIA 443
            ||||:||||||||:.:||:|||:|..|:|||||.|||||||||..||.|||||||||.|||||||
Mouse   390 WLVISDFGCCLADQHVGLRLPFNSSSVERGGNGSLMAPEVSTAHSGPSAVIDYSKADTWAVGAIA 454

Human   444 YEIFGLVNPFYGQGKAHLESRSYQEAQLPALPESVPPDVRQLVRALLQREASKRPSARVAANVLH 508
            ||||||.|||||||.||||||||||||||.:||||||:.|:|||:|||||||||||||:||||||
Mouse   455 YEIFGLANPFYGQGSAHLESRSYQEAQLPEMPESVPPEARRLVRSLLQREASKRPSARLAANVLH 519

Human   509 LSLWGEHILALKNLKLDKMVGWLLQQSAATLLANRLTEKCCVETKMKMLFLANLECETLCQAALL 573
            |||||||:|||||||||||:.||||||||||||:||.||.|||||::||||||||||.|||||||
Mouse   520 LSLWGEHLLALKNLKLDKMIAWLLQQSAATLLADRLREKSCVETKLQMLFLANLECEALCQAALL 584

Human   574 LCSWRAA 580
            |.|||||
Mouse   585 LSSWRAA 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PINK1NP_115785.1 Required for outer membrane localization. /evidence=ECO:0000269|PubMed:30733118 111..117 5/5 (100%)
STKc_PINK1 162..512 CDD:270920 285/361 (79%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..208 7/18 (39%)
Pink1XP_036020293.1 STKc_PINK1 162..523 CDD:270920 285/361 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83956523
Domainoid 1 1.000 408 1.000 Domainoid score I11042
eggNOG 1 0.900 - - E1_KOG4158
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32672
Inparanoid 1 1.050 937 1.000 Inparanoid score I6388
Isobase 1 0.950 - 0 Normalized mean entropy S4469
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG41021
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008271
OrthoInspector 1 1.000 - - oto114248
orthoMCL 1 0.900 - - OOG6_109238
Panther 1 1.100 - - LDO PTHR22972
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7349
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1717.210

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