DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRPL40 and mrpl40

DIOPT Version :10

Sequence 1:NP_003767.2 Gene:MRPL40 / 64976 HGNCID:14491 Length:206 Species:Homo sapiens
Sequence 2:NP_001016249.1 Gene:mrpl40 / 549003 XenbaseID:XB-GENE-998670 Length:199 Species:Xenopus tropicalis


Alignment Length:179 Identity:100/179 - (55%)
Similarity:133/179 - (74%) Gaps:4/179 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    23 WQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIED 87
            |:   ||:|.:.|||:....||||:|| |||||||||::|..:||:|:|::|||:...:||||||
 Frog    25 WR---RESHWQTSLLTLRSTIPMRAEP-RKKKKVDPKREQAIRERMKKKLKKLERIPPQLIPIED 85

Human    88 FITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQL 152
            ||.|.||||:.|.|...::|.||.||||||:|.|:|.||||.:.|...::::||||:|||.||:|
 Frog    86 FIKPAKFLDETRVRTPPQITPEEQERRALLMKTWALSKQQEHEAENRGLQSLLEAQEEALRELRL 150

Human   153 ESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQ 201
            ||.:|:..||..||.|.|.|.:||..|||:|.|..|:|:|||:||||||
 Frog   151 ESEELYNAAILTDPGLLPLESQGPCNTPPVPQYNAPDGKYNDVTKVYTQ 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPL40NP_003767.2 MRP-L28 45..199 CDD:430845 87/153 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..192 12/23 (52%)
mrpl40NP_001016249.1 MRP-L28 44..197 CDD:430845 87/153 (57%)

Return to query results.
Submit another query.