DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chico and si:ch73-335l21.1

DIOPT Version :9

Sequence 1:NP_001188772.1 Gene:chico / 64880 FlyBaseID:FBgn0024248 Length:968 Species:Drosophila melanogaster
Sequence 2:XP_021333440.1 Gene:si:ch73-335l21.1 / 794738 ZFINID:ZDB-GENE-130530-591 Length:1249 Species:Danio rerio


Alignment Length:1178 Identity:256/1178 - (21%)
Similarity:421/1178 - (35%) Gaps:373/1178 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SDDGMALSGYLKKLKTMKKKFFVLYEETSTSAARLEYYDTEKKFLQRAE-PKRVIYLKNCFNINR 68
            |.:.:..||||:|.|:|.:::|||...:....||||||::||||..:|. ||:.:.|:.|||||:
Zfish    10 STEDVRRSGYLRKQKSMHRRYFVLRAASERGPARLEYYESEKKFRGKAPVPKKALALETCFNINK 74

  Fly    69 RLDTKHRFVIVLSSRDGGFGIVLENENDLRKWLDKLLVLQRN----IANSNGTAH---SP---YD 123
            |.|:|::.:|||.:|...|.:..|||.|..:|...::.||..    ..|:||..:   ||   :.
Zfish    75 RADSKNKHMIVLYTRAESFVVAAENEADQEEWYQAMVELQCKSKALCENANGGDYGVPSPGPAFK 139

  Fly   124 HVWQVVIQKKGISEKVGITGTYHCCLTSKSLTFVCIGPEKTPNGEDRVASIEILLTTIRRCGHAS 188
            .||||.:..||:.:...:.|.|..|||.|::.||.:       ..|.|| :.:.|..:|||||: 
Zfish   140 EVWQVKVWPKGLGQAKNLVGIYRLCLTEKTVNFVKL-------NSDAVA-VVLQLMNVRRCGHS- 195

  Fly   189 PQCIFYVELGRQSVLGSGDLWMETDNAAIATNMHNTILSAMSAKTESNTNLINVYQNRPDLSHEP 253
             :..|:||:||.:|.|.|:.||:.|::.:|.|||.|:|.||.|.:|.                  
Zfish   196 -ENFFFVEVGRSAVTGPGEFWMQVDDSVVAQNMHETLLEAMKALSEE------------------ 241

  Fly   254 MRKRSSS---------ANEASKPINVNVIQNSQN-------------------SLELRSCSSPHN 290
            .|:||.|         ...||.||:|...::..|                   :....:.|....
Zfish   242 FRQRSKSQSTAAGAGGGTTASNPISVPSRRHHPNPPPSQVGFTRRPRTEPPGSTAGCNNTSPASR 306

  Fly   291 YGFGRER---------------------CDSLPTRNGTLSESSNQTYFGSNHGLRSNTISGIRP- 333
            :.|.|.|                     |.| ||.||::|.:..         |||.::....| 
Zfish   307 HSFPRTRTSSDGAKVDDGGCATTGEIMPCSS-PTTNGSVSNTPI---------LRSTSVRASTPV 361

  Fly   334 -------HSTNKHSNSPTFTMP---LRCSESEESSISVDESDDNGSFSHY-RLNTRSSETAIPEE 387
                   .||:..:.|...:||   :..||...:......|....:.|.| ||..|....:   .
Zfish   362 KAQHALMRSTSTPAPSAAPSMPSGSVHGSEFCATGTGTGNSGGGANGSMYSRLPLRQPSVS---G 423

  Fly   388 NIDDFASAELF-------SKVT------------EQNVSDE--NYIPMNPVNPTDAIHEKEKADM 431
            ::.|:.|::.:       |.:|            ..::.||  |||.|:                
Zfish   424 SLSDYGSSDEYGSSPGEHSLLTPTMQAGFTASSGSNSLGDEASNYILMS---------------- 472

  Fly   432 QRLEDASLHFNFPEHASEKLAKDFDLDSDNQCCRPIRAYSIGNKVEHLKFNKRLGHLNDTGQNPN 496
            ||   .|......::|..:..:.....|..:|....|..|....:..:.. :||..|...|:...
Zfish   473 QR---GSSKSQTSQNALPQTRRVLRRSSSRECEAERRIMSKRASLPPMAL-ERLAPLRRAGEEAV 533

  Fly   497 RVRAYSVGSKSKIPRCDLQRVVLVEDNKHEFTANRSQSSITKEGTSY-----------GSSANRQ 550
            ....|::.:::              .::..|.| |..|..:..||.|           |||    
Zfish   534 EEDDYAIMNQT--------------SSRESFVA-RQDSGPSTSGTGYLEVAAEIKGDGGSS---- 579

  Fly   551 KKSTSAPLLSLKNQINSDRMSDLMEIDFSQATNLEKQKFIKNNEIPKYIENVFPKAPRTDSSSLT 615
            ....:|.:...|..:::..||.|..:                         ..|....:.|.|:|
Zfish   580 DTGITAVIGGAKGAVDNGYMSMLPGV-------------------------TAPPVSLSHSLSVT 619

  Fly   616 LHATSQK--DIFNGTKLNNTAI--------TSEDGYLEMKPVGNGYTPSSNCLP----------- 659
            :..:..|  |.:.....||:..        :..|||:.|       :|:|:|.|           
Zfish   620 VSDSDSKSADDYMAMTPNNSISPPRQIRPPSGTDGYMMM-------SPNSSCSPDQRGVPTAWIG 677

  Fly   660 -MKVEKLKLSDYQTAPPLTATAAPVHDLNKISTYNISAEKWREQPSRSEEKKSNSPLNDNTFS-- 721
             ...:....|||....|::|.:|             ::.....:|....::.||.|.....:|  
Zfish   678 SSSADSRTGSDYMNMSPISARSA-------------NSTPPPPEPHTPSDQHSNQPQPKMVYSYY 729

  Fly   722 SKPTNVESTSKSHDVHSANQIDCEKVCAQSSDKLNNHLADKIVENNNLDIGG----------HEE 776
            |.|.:.:..:.:|              .:.......||.     |....|||          |:|
Zfish   730 SLPRSYKHNTSTH--------------FEEGPGRGKHLV-----NGGKGIGGGRGLCNSKSKHQE 775

  Fly   777 KKLV--H-SISSEDYTQIKDKSNDFTKFNEAGYKILQIKSDSSLISSKLYQKGI----------- 827
             .||  | |:||..|:.....|.   ...|...|.::....::.:::|..::|.           
Zfish   776 -PLVGRHLSLSSSSYSSSSASSE---SLGEGEEKAIKGTGGAAGVTAKDIERGSLQQRQGSGRAK 836

  Fly   828 --HKDNLERSQRL---TESVNTIP-------------------------------DNATATAVSS 856
              |..:..|...|   ....||:|                               .|.|......
Zfish   837 QGHSGHRGRPLSLFVDVNKANTLPRVRETPLLPEPKSPGEYVSIEFKGERNQKAEGNGTRGFRQD 901

  Fly   857 SSL-TKFNINSAKPAAA-------ADSRSTGTDPSTPQNI-------------LQIKDLNFPSRS 900
            :|| ...:.:..:|.:.       :.|.||...|||....             :.:..|.|||..
Zfish   902 ASLPPSSHRHLPRPTSCVAGFLQFSQSSSTPIPPSTASEYVNMELGVSLSPSPISLTPLGFPSFP 966

  Fly   901 SSRI---SQPELH--YASLDLPHCSGQNPAKYLKRGSRESPPVSACPEDGNT-----YAKIDFDQ 955
            :..:   :.|:.|  :.|..|.....:.  :..:|.||:    .:.|:.|::     |.|:.|..
Zfish   967 TPPVTPAAAPKAHDEHRSTVLNDIGAER--EMAQRKSRQ----GSVPQSGDSPTCGDYTKMAFSL 1025

  Fly   956 SDSSSSSS 963
            :..|:.||
Zfish  1026 NSGSTLSS 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chicoNP_001188772.1 PH_IRS 7..112 CDD:269959 44/109 (40%)
PH 25..104 CDD:278594 35/79 (44%)
PTB_IRS 122..235 CDD:269915 43/112 (38%)
si:ch73-335l21.1XP_021333440.1 PH_IRS 12..114 CDD:269959 42/101 (42%)
PTB_IRS 138..241 CDD:269915 43/112 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586780
Domainoid 1 1.000 94 1.000 Domainoid score I7398
eggNOG 1 0.900 - - E1_28N3R
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001178
OrthoInspector 1 1.000 - - otm24799
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10614
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1499
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.890

Return to query results.
Submit another query.