DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chico and irs2

DIOPT Version :9

Sequence 1:NP_001188772.1 Gene:chico / 64880 FlyBaseID:FBgn0024248 Length:968 Species:Drosophila melanogaster
Sequence 2:XP_031755459.1 Gene:irs2 / 394823 XenbaseID:XB-GENE-6455904 Length:809 Species:Xenopus tropicalis


Alignment Length:1049 Identity:222/1049 - (21%)
Similarity:370/1049 - (35%) Gaps:371/1049 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GYLKKLKTMKKKFFVLYEETSTSAARLEYYDTEKKFLQRAE----PKRVIYLKNCFNINRRLDTK 73
            |||:|.|:|:|::|||....:...||||||:.|||| :.||    |:.|:.|:..|.:|:|.|.|
 Frog     8 GYLRKQKSMRKRYFVLRCPGTRGPARLEYYENEKKF-RVAEGSGGPRGVLNLEEAFGVNKRSDAK 71

  Fly    74 HRFVIVLSSRDGGFGIVLENENDLRKWLDKLLVLQRNIANSNGTAHSP---------YDHVWQVV 129
            .|.::|:.:||||.|:..:.|.:..:|...:|.:|   |.:...:.||         :..||||.
 Frog    72 KRHLLVIYTRDGGLGVSADGEEEQDEWYQAILEVQ---AQAR
ALSSSPDAPAWPGPAFREVWQVS 133

  Fly   130 IQKKGISEKVGITGTYHCCLTSKSLTFVCIGPEKTPNGEDRVASIEILLTTIRRCGHASPQCIFY 194
            ::.:|:.:...::|.|..||..::|..:.:..|.        .|:.:.|..:|||||:..  .|:
 Frog   134 VRPRGLGQTRNLSGIYRLCLAERTLGLLRLRSEN--------PSVTLQLMNVRRCGHSDN--YFF 188

  Fly   195 VELGRQSVLGSGDLWMETDNAAIATNMHNTILSAMSAKTESNTNLINVYQNRPDLSHEPMRKRSS 259
            ||:||.:|.|.|:|||:.:::.:|.|||.|||.||.:.:|.                  .|.|:.
 Frog   189 VEVGRSAVTGPGELWMQVEDSVVAQNMHETILEAMKSLSEE------------------FRPRTK 235

  Fly   260 SANEASKPINVNVIQNSQNSLELRSCSSPHNYGFGRERCDSLPTRNGTLSESSNQTYFGSNHGLR 324
            |.:.:|.||:|...::..|.      ..|...|..|......|..|..:.               
 Frog   236 SQSLSSTPISVPSRRHHPNP------PPPSQVGISRRSRAETPIENSPVP--------------- 279

  Fly   325 SNTISGIRPHSTNKHSNSPTFTMPLRCSESEESSISVDESDDNGSFSHYRLNTRSSETAIPEENI 389
                   :|||.:|..:          .:|.|     :|.::.|:    |:.|..|.......:.
 Frog   280 -------KPHSLSKDYS----------VQSPE-----EEEEEKGA----RVETNESSADYGSASS 318

  Fly   390 DDFASAELFSKVTEQNV--------SDENYIPMNPVNPTDAIHEKEKADMQRLEDASLHFNFPEH 446
            |::.|:   ..|.|..|        .:.|||.|       |::.:....|   |..|.:.|.|..
 Frog   319 DEYGSS---PGVLEAPVFLPPSPGPRETNYISM-------ALYGRRSLVM---EPISTNANVPAE 370

  Fly   447 ASEKLAKDFDLDSDNQCCRPIRAYSIGNKVEHLKFNKRLGHLNDTGQNPNRVRAYSVGSKSKIPR 511
            ...:|                                                            
 Frog   371 EGSRL------------------------------------------------------------ 375

  Fly   512 CDLQRVVLVEDNKHEFTANRSQSSITKEGTSYGSSANRQKKSTSA--PLLSLKNQINSDRMSDLM 574
                                   ::.:|..:|.....|:.:..:.  |:|.     .|:|..|.|
 Frog   376 -----------------------TLFQEEDNYAMMGQREPRQETGYMPMLP-----GSNRSQDYM 412

  Fly   575 EIDFSQATNLEKQKFIKNNEIPKYIENVFPKAPRTDSSSLTLHATSQKDIFNGTKLNNTAITSED 639
                                         |..|                    |.::..|.....
 Frog   413 -----------------------------PMTP--------------------TSISPPAPVEMA 428

  Fly   640 GYLEMKPVGNGYTPSSNCLPMKVEKLKLSDYQTAPPLTATAAPVHDLNKISTYNISAEKWREQPS 704
            ||:.|.|:|       :|.| ::|:|      :.||....:|...|.:.....|:    |    |
 Frog   429 GYVMMSPLG-------SCSP-EIERL------SWPPSQEVSAGSSDSHASDYMNM----W----S 471

  Fly   705 RSEEKKSNSPLNDNTFSSK------PTNVESTSKSHDVHSANQIDCEKVCAQSSDKLNNHLADK- 762
            .|....|..|..:...||.      |.:..|..:|:.:..  |......|:.|||.|....|.| 
 Frog   472 LSRSASSTPPPQEAFLSSPGGPCRVPASYRSLPRSYKMEP--QPSARASCSSSSDSLEEVNAGKN 534

  Fly   763 -------IVENNNLDIGGH-----------------EEKKLV---------HSISSEDYTQIKDK 794
                   |...|...:.|:                 .:||..         .|:|.|:..... .
 Frog   535 RRPLSISIDSWNTGTLSGNYRRPPSPGEYVSIHFRAPQKKTSGKEAIDAPRESVSMEEQPSAM-P 598

  Fly   795 SNDFTKFNEAGYKILQ--IKSDSSLISSKLYQKGIHKDN-----------LER--SQRLTESVN- 843
            :.|:|:.:...::.||  :|::.        ::|.:.:|           ||:  |::.:.:|: 
 Frog   599 NGDYTEMDFVPHRTLQPHVKTNE--------ERGTNGENAFKPVGKLLPALEKTSSEKDSWAVDK 655

  Fly   844 ----TIPDNATATAVSSSSLTKFNINSAKPAA------AADSRSTG------------TDPSTPQ 886
                |....||...:.|.......:.:.||:|      :..|..||            .||||.:
 Frog   656 ALWPTTLREATGIPIESDLGRPEKVLAPKPSAEEPELKSLVSAVTGCSLNMGQDPPMRLDPSTRK 720

  Fly   887 NILQIKDLNFPSR-SSSRIS--QPELHYASLDLPH--CSGQNPAKYLKRGSRESPPVSA--CPED 944
            .... :.:..|:. :.:|.:  :|.|:|..|||..  ..|..||..:.:|....|.:.:  .|.:
 Frog   721 RHCS-ESVRPPAPCNGTRAAALEPGLNYIDLDLSKDAAGGVPPAVLVGQGGAPPPKIGSLGAPPN 784

  Fly   945 GNTYAKIDF 953
            .||||.|||
 Frog   785 INTYASIDF 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chicoNP_001188772.1 PH_IRS 7..112 CDD:269959 41/102 (40%)
PH 25..104 CDD:278594 32/82 (39%)
PTB_IRS 122..235 CDD:269915 38/112 (34%)
irs2XP_031755459.1 PH_IRS 2..110 CDD:269959 42/105 (40%)
PTB_IRS 126..229 CDD:269915 38/112 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 89 1.000 Domainoid score I7707
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001178
OrthoInspector 1 1.000 - - otm48488
Panther 1 1.100 - - O PTHR10614
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4611
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.130

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