DRSC/TRiP Functional Genomics Resources

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Protein Alignment chico and LOC100498409

DIOPT Version :9

Sequence 1:NP_001188772.1 Gene:chico / 64880 FlyBaseID:FBgn0024248 Length:968 Species:Drosophila melanogaster
Sequence 2:XP_002933054.3 Gene:LOC100498409 / 100498409 -ID:- Length:1007 Species:Xenopus tropicalis


Alignment Length:1109 Identity:239/1109 - (21%)
Similarity:407/1109 - (36%) Gaps:316/1109 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GYLKKLKTMKKKFFVLYEE-TSTSAARLEYYDTEKKFLQR-AEPKRVIYLKNCFNINRRLDTKHR 75
            |||:|.|...|:||||.|. ....|||||||::|||:..: |..||||.|.:|.|||:|.|.|::
 Frog    33 GYLRKQKHGHKRFFVLREAGEGCPAARLEYYESEKKWRSKSAAAKRVISLDSCLNINKRADAKNK 97

  Fly    76 FVIVLSSRDGGFGIVLENENDLRKW---LDKLLVLQRN----IANSNG----------------- 116
            ::|.|.:||..|.:..::|.:...|   |.:||...|.    .|.:.|                 
 Frog    98 YLIALYTRDEYFAVAADSEQEQESWYRALTELLSTGRGAKEACAGTGGCCCCPGTASCSSSCTNH 162

  Fly   117 -----------TAHSPYDHVWQVVIQKKGISEKVGITGTYHCCLTSKSLTFVCIGPEKTPNGEDR 170
                       .|::.|..:|||.::.:|:.:...:||.|..||:::|::||.:..| ||     
 Frog   163 LALTEDYGLITPANAVYKEMWQVNLKPRGLGQIKNMTGVYRLCLSARSISFVRLNSE-TP----- 221

  Fly   171 VASIEILLTTIRRCGHASPQCIFYVELGRQSVLGSGDLWMETDNAAIATNMHNTILSAMSAKTES 235
              |:.:.|..||||||:..  .|:||:||.:..|.|::||:.|:..:|.::|.|||.||.|..| 
 Frog   222 --SVTLQLMNIRRCGHSDN--YFFVEVGRSASTGPGEIWMQVDDTVVAQSIHETILEAMKAMRE- 281

  Fly   236 NTNLINVYQNRPDLSHEPMRKRSSSANEASKPINVNVIQNSQNSLELRSCSSPHNYGFGRERCDS 300
               |:.            .|.||.|.:.:|.||:|...::..|.|      .|...|..|.....
 Frog   282 ---LVE------------FRPRSKSQSSSSNPISVPGRRHHLNQL------PPSQTGLTRRTRTD 325

  Fly   301 LPTRNGTLSESSNQTYFGSNHG--LRSNTISG------------IRPHSTN-------------- 337
            .|:.:..:|.:::.....::.|  |.:.|::|            .|.|:.:              
 Frog   326 FPSTSVCVSANTSSRLRTASEGDNLSNRTVTGSPLSPSMLRAPLSRSHTLSLCGRNTKLVPIPGP 390

  Fly   338 -KHSNSPTFTMPLRCSESEESSISVDESDDNGSFSHYRLNTRSSETAIPEENIDDFASAELFSKV 401
             :||.|.:..:| |...:..|.||:.....:|..|       :|:..||.::....|||      
 Frog   391 LQHSRSMSMPVP-RSPPTAASPISLSSGSSSGHGS-------TSDPLIPPQSFSCSASA------ 441

  Fly   402 TEQNVSDENYIPMNPVNPTDAIHEKEKADMQRL---------EDASLHFNFPEHASE-----KLA 452
             ..:.||..::.::.       :.....::.|:         :.||.   .|.|..|     .:.
 Frog   442 -SGSPSDTGFMSLDE-------YSSSPGEIARVYLSCPSGTPDSASA---TPPHHGELNGYMSME 495

  Fly   453 KDFDLDSDNQC-CRPIRAYSIGNKVEHLKFNKRLGHLNDTGQNPNRVRAYSVGSKSKIPRCDLQR 516
            :.|    ...| ||            ||:        ....:...|.|.||:.:..:      ||
 Frog   496 RQF----PGVCSCR------------HLE--------GSVAEKCARKRTYSLTTPGR------QR 530

  Fly   517 VVLVEDNKHEFTANRSQSSITKEGTSYGSSANRQKKSTSAPLLSLK------NQINSDRMSDLME 575
            :.    ..|..:|:..::::.: .|..|||.    ..:|:|.:|.:      ..:...|..| ..
 Frog   531 MA----PPHVSSASLDEATLVR-ATYKGSSG----LLSSSPKVSYQPYPEDYADVEIGRQDD-GY 585

  Fly   576 IDFSQATNLEKQKFIKNNEIPKYIENVFPKAPRTDSS--SLTLHATSQKDIFNGTKLNNTAITSE 638
            :..|....:....::             |.:|.:.|:  .:....|...:.|.|::.:     |.
 Frog   586 MPMSHGVGVSSSDYV-------------PMSPASVSAPQQILQPRTCCSETFEGSQED-----SP 632

  Fly   639 DGYLEMKPVGNGYTPSSNCLPMKVEKLKLSDYQTAPPLTATAAPVH----------DLNKISTYN 693
            |||:.|     ...|.|..:|:. ::|     ..|..||:...|.:          :.|.::..:
 Frog   633 DGYMRM-----WCGPKSRTVPVH-QRL-----SPAESLTSFTPPDYFYMQSKNSCCETNSVACRS 686

  Fly   694 ISAEKWREQ--------------------------PSRSEE-KKSNSPLNDNTF-----SSKPTN 726
            ||..:....                          ||.||. .:|:||......     .::|..
 Frog   687 ISPAEVEPYVMMRSPASSSQHIRIARPSRLALPTLPSMSEHPPESSSPPGGEYIHIYFGETRPQE 751

  Fly   727 VESTSKSHDVHSANQIDCEKVCAQSSDKLNNHLADKIVENNNLDIGGHEEKKLVHSI--SSEDYT 789
            ..|.........:..:......|.||...:......:.:..|||......|..::|.  .:.|||
 Frog   752 SLSVPPPTTATESVLLSAGGSPASSSSSGSGPQRSPVSDYMNLDFCPPSPKSKINSSLGPNSDYT 816

  Fly   790 QIKDKSNDFTKFNEAGYKILQIKSDSSLISSKLYQKGIHKDNLERSQRLTESVNTIPDNATATAV 854
            ::..:     |.:......:.:...|||..:   ..|:        |.||..::.||.|.:..:.
 Frog   817 EMSPR-----KISACSMSDVSLHETSSLEGA---GSGV--------QCLTLLMDKIPGNFSLPSP 865

  Fly   855 SSSSLTKFNINSAKPAAAADSRSTGTDPST-------------PQNILQIKDLNFPSRSSSRISQ 906
            .........:..|.|.......|:.|..||             |:........|..:||...:..
 Frog   866 PPDPNRGAKLIRADPQGGRRRHSSETFSSTTQVTPVSPSFAHSPKRHSSASVENVSTRSGETLEA 930

  Fly   907 PE----------------LHYASLDLPHCSGQNPAK----YLKRGSRES--PPVSACPEDGNTYA 949
            ||                |:|.:::|      :|.|    .|.:.|...  |.:.....|..:|:
 Frog   931 PECGSPMCRETSAGFQNGLNYIAMEL------SPEKRNLLLLTQASSRGHLPALGLASLDIGSYS 989

  Fly   950 KIDF 953
            .|||
 Frog   990 SIDF 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chicoNP_001188772.1 PH_IRS 7..112 CDD:269959 45/107 (42%)
PH 25..104 CDD:278594 36/83 (43%)
PTB_IRS 122..235 CDD:269915 42/112 (38%)
LOC100498409XP_002933054.3 PH_IRS 29..134 CDD:269959 44/100 (44%)
PTB_IRS 179..282 CDD:269915 43/116 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 89 1.000 Domainoid score I7707
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001178
OrthoInspector 1 1.000 - - otm48488
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1499
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.000

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