DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-A2 and ampd2b

DIOPT Version :9

Sequence 1:NP_525020.2 Gene:Adgf-A2 / 64879 FlyBaseID:FBgn0043025 Length:561 Species:Drosophila melanogaster
Sequence 2:XP_009302285.3 Gene:ampd2b / 571355 ZFINID:ZDB-GENE-070713-5 Length:830 Species:Danio rerio


Alignment Length:504 Identity:103/504 - (20%)
Similarity:194/504 - (38%) Gaps:117/504 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 RRQRLGSRMGLSPLEEEANDRLMAIRQV-DEEFYNLWRNYHSQPPPFLKHLNIIDTNLYA----- 150
            |.|.|.|:..:..|..|..: |.|.::| ..:|||:.:               :||:::|     
Zfish   330 RLQYLSSKFQMHILLNEMKE-LAAQKKVPHRDFYNIRK---------------VDTHIHASSCMN 378

  Fly   151 ----------ALKSMPKGGLLHVHDSGMLRMEILIDLIYRDNLWV------CVNLEQDFEDF-RF 198
                      |:|..| |.::||...   |.:.|.::....||..      .:::..|...| ||
Zfish   379 QKHLLRFIKRAMKKYP-GEIVHVEQG---RGQTLTEVFESMNLTAFDLSVDTLDMHADRNTFHRF 439

  Fly   199 SRYFPHIPPAEDYQCNWMLMSNFFQLESRLE---FENRLRKTLTVRPEGYKSSSELARHLRRHQR 260
            .::.....|..:.    :|...|.:.::.:|   |.:.:::.:....|....:.||       :.
Zfish   440 DKFNSKYNPIGES----ILREIFIKTDNHIEGKYFGHIIKEVMADLEESKYQNVEL-------RL 493

  Fly   261 IIHGLITFRPIWSEFI-FTMLSDFYADGVHYVELRSSLPNMYDLDGNNFTILETAEALVSVSNIF 324
            .|:|  ..|..|.:.. :.:....|:|.|.::   ..:|.::|       :..|.:.|.:...:.
Zfish   494 SIYG--RSRDEWDKLAQWAVTHKVYSDNVRWL---VQVPRLFD-------VYHTKKQLSNFQEML 546

  Fly   325 KNSFKDFIGIKLIYAPSRNLN---------DSRMDEYLENARLLKLHFPNFFAGFDLNTFGDECN 380
            .|.|.....:.:..:....|:         ||..||......:..|..|.     .:| :.||.|
Zfish   547 ANIFMPLFEVTVNPSSHPELHLFLQHVVGFDSVDDESKPEHHIFNLDSPK-----PVN-WTDEDN 605

  Fly   381 LP-------LLENVTQL--LRIGKNIDFYF---HAGESRCPDSSRPDANLLEALLLQSKRIGNAV 433
            .|       :..|:|.|  ||..:|::.:.   |.||      :.|..:|:...:| |:.|.:.:
Zfish   606 PPYSYYLYYMYANMTVLNHLRRQRNMNSFVLRPHCGE------AGPIHHLVSGFML-SENISHGL 663

  Fly   434 NLPFHPEIMKVMKRLSIAVEICPLSNHYLQYFNDFRQHPAAYLIAAGFPIVIGSDYPC--FWNSA 496
            .|...|.:..:.....|.:.:.||||:.|  |..:.::|....::.|..:.:.:|.|.  .:...
Zfish   664 LLRKAPVLQYLYYLAQIGIAMSPLSNNSL--FLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKE 726

  Fly   497 PLTDDFYVAF-VGVISGWGDLRLLKQFALNSFLFSSLSETEKNMAVSKW 544
            ||.:::.:|. |..:|...    :.:.|.||.|.|..|    |...|.|
Zfish   727 PLMEEYSIAAQVWKLSSCD----MCELARNSVLMSGFS----NQVKSYW 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-A2NP_525020.2 A_deaminase_N 52..152 CDD:285627 15/75 (20%)
adm_rel 83..556 CDD:273620 103/504 (20%)
ADGF 135..548 CDD:238646 91/460 (20%)
ampd2bXP_009302285.3 AMPD 307..803 CDD:238644 103/504 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.