DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-A2 and ampd3a

DIOPT Version :9

Sequence 1:NP_525020.2 Gene:Adgf-A2 / 64879 FlyBaseID:FBgn0043025 Length:561 Species:Drosophila melanogaster
Sequence 2:XP_009301872.1 Gene:ampd3a / 556578 ZFINID:ZDB-GENE-110407-2 Length:778 Species:Danio rerio


Alignment Length:572 Identity:107/572 - (18%)
Similarity:189/572 - (33%) Gaps:213/572 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VLVLICSAPLGENMSNLTSEERHARLRQIYIEKERRQRLGSRMGLSPLEEEANDRLMAIRQV-DE 121
            ||.:|...|        |....|.||          ..|||:..|..:..|..: |..::.| ..
Zfish   274 VLAMIADGP--------TKTYCHRRL----------NFLGSKFYLHEMLNEMAE-LKELKGVPHR 319

  Fly   122 EFYNLWRNYHSQPPPFLKHLNIIDTNLYAALKSMPKGGLLHVHDSGMLRMEILIDLI---YR--- 180
            :|||:.:               :||               |:|.:..:..:.|:|.|   |:   
Zfish   320 DFYNVRK---------------VDT---------------HIHAAACMNQKHLLDFIQTTYKTDA 354

  Fly   181 -----DNLWVCVNLEQDFEDFRFSRYFPHIPPAEDYQCNWMLMSNFFQLESRLEFENRLRKTLTV 240
                 :...:.:.|:|.|.:.....|...: .:.|..........|.:..|:            .
Zfish   355 ERVVLEKAGLKLTLKQVFNNLNMDPYDLTV-DSLDVHAGRQTFHRFDKFNSK------------Y 406

  Fly   241 RPEGYKSSSELARHLRRHQRIIHGLITFRPIWSEFIFTMLSDFYADGVHYVELRSSLPNMYDLDG 305
            .|.|   :|||                 |.|:      :.:|.|.:|.::..|...:  .::|:.
Zfish   407 NPVG---ASEL-----------------REIY------LKADNYINGEYFARLIKEV--AHNLEE 443

  Fly   306 NNFTILETAEALVSV-----------------SNIFKNSFKDFIGIKLIY--APSRNL--NDSRM 349
            :.:   :.||..:|:                 :.::..:.:..|.:..||  ..||.|  |.::|
Zfish   444 SKY---QHAEPRLSIYGRSPEEWESLSHWFIQNKVYSPNMRWIIQVPRIYDIFRSRKLVPNFAKM 505

  Fly   350 DEYLENARL------------LKLH-FPNFFAGFDLNTFGDE----------------------- 378
               |||..|            .:|| |..:..|||  :..||                       
Zfish   506 ---LENVFLPLFEATVNPQKHKELHVFLKYVTGFD--SVDDESKHSDHMFSYKSPKPEQWTTDDN 565

  Fly   379 -----------CNLPLLENVTQLLRIGKNID-FYF--HAGESRCPDSSRPDANLLEALLLQSKRI 429
                       .|:.:|.|    ||..:.:. |.|  |.||:       .....|.:..|.:..|
Zfish   566 PPYSYYLFHMYANIMVLNN----LRKERGLSTFQFRPHCGEA-------GSITHLVSAFLTADNI 619

  Fly   430 GNAVNLPFHPEIMKVMKRLSIAVEICPLSNHYLQYFNDFRQHPAAYLIAAGFPIVIGSDYPC--F 492
            .:.:||...|.:..:.....:.:.:.||||:.|  |.::.::|....:..|..:.:.:|.|.  .
Zfish   620 SHGLNLKKSPVLQYLYYLAQVPIAMSPLSNNSL--FLEYSKNPLREFLHKGLCVSLSTDDPMQFH 682

  Fly   493 WNSAPLTDDFYVAFVGVISGWGDLRLLK-------QFALNSFLFSSLSETEK 537
            :....|.:::.:|          .:|.|       :.|.||.|.|.||..||
Zfish   683 YTKEALMEEYAIA----------AQLWKLSTCDVCEIARNSVLQSGLSHEEK 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-A2NP_525020.2 A_deaminase_N 52..152 CDD:285627 20/94 (21%)
adm_rel 83..556 CDD:273620 100/547 (18%)
ADGF 135..548 CDD:238646 89/494 (18%)
ampd3aXP_009301872.1 metallo-dependent_hydrolases 158..766 CDD:294200 107/572 (19%)
PLN03055 199..766 CDD:178613 107/572 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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