DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adgf-A2 and ampd3b

DIOPT Version :9

Sequence 1:NP_525020.2 Gene:Adgf-A2 / 64879 FlyBaseID:FBgn0043025 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_956142.1 Gene:ampd3b / 333997 ZFINID:ZDB-GENE-030131-5929 Length:779 Species:Danio rerio


Alignment Length:522 Identity:99/522 - (18%)
Similarity:190/522 - (36%) Gaps:113/522 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VLVLICSAPLGENMSNLTSEERHARLRQIYIEKERRQRLGSRMGLSPLEEEANDRLMAIRQVDEE 122
            ||.:|...|        |....|.||..:..:.:..:.|.....|..|:...:          .:
Zfish   273 VLAMIADGP--------TKTYCHRRLNFLTSKFQLHEMLNEMAELKELKCVPH----------RD 319

  Fly   123 FYNLWRNYHSQPPPFLKHLNIIDTNLYAALKSMPKGGLLHVHDSGMLRMEILIDLIYRDNLWVCV 187
            |||:.:               :||:::||.....|..|..:.||    .:...|.:..:......
Zfish   320 FYNVRK---------------VDTHIHAAACMNQKHLLKFIQDS----YQTEADRVVLEKGGKKF 365

  Fly   188 NLEQDFEDFRFSRYFPHIPPAEDYQCNWMLMSNFFQLESRLE--FENRLRKTLTVRPEGYKSSSE 250
            .|:|.||:.:...|...: .:.|..........|.:..|:..  ..|.||: :.::.:.|.:...
Zfish   366 TLKQVFENLKMDPYDLTV-DSLDVHAGRQTFHRFDKFNSKYNPVGANELRE-IYLKTDNYINGEY 428

  Fly   251 LARHLRRHQRIIHGLITFRPIWSE---FIF--------TMLSDFYADGVHYVELR--SSLPNMYD 302
            .||.::   .:.|.|...:...:|   .|:        ::...|....:|...:|  ..:|.:||
Zfish   429 FARLIK---EVAHDLEESKYQHAEPRLSIYGRAPEEWESLSKWFIMQKLHSPNMRWMIQVPRIYD 490

  Fly   303 LDGNNFTILETAEALVSVSNIFKNSFKDFIG----------IKLIYAPSRNLNDSRMDEYLENAR 357
            :..:...|...|:.|   .|||...|:..:.          :|.:...:...::|:..:::.|.:
Zfish   491 IFRSKKIIANFAKML---ENIFLPLFQATVNPQKHKEMHVFLKHVTGFNSVDDESKHSDHIFNYK 552

  Fly   358 LLKLHFPNFFAG-----FDLNTFGDECNLPLLENVTQLLRIGKNID-FYF--HAGESRCPDSSRP 414
            ..|   |..:..     :....|....|:.:|.|    ||..:.:: |.|  |.||:       .
Zfish   553 SPK---PEEWTSEENPPYTYYLFHMYANIMVLNN----LRKERGLNTFLFRPHCGEA-------G 603

  Fly   415 DANLLEALLLQSKRIGNAVNLPFHPEIMKVMKRLSIAVEICPLSNHYLQYFNDFRQHPAAYLIAA 479
            ....|.:..|.:..|.:.:||...|.:..:.....:.:.:.||||:.|  |.::.::|....:..
Zfish   604 SITHLVSAFLTADNISHGLNLKKSPVLQYLYYLAQVPIAMSPLSNNSL--FLEYSKNPLREFLQK 666

  Fly   480 GFPIVIGSDYPC--FWNSAPLTDDFYVAFVGVISGWGDLRLLK-------QFALNSFLFSSLSET 535
            |..:.:.:|.|.  .:....|.:::.:|          .:|.|       :.|.||.|.|.||..
Zfish   667 GLCVSLSTDDPLQFHYTKEALMEEYAIA----------AQLWKLSTCDTCEIARNSVLQSGLSHQ 721

  Fly   536 EK 537
            ||
Zfish   722 EK 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adgf-A2NP_525020.2 A_deaminase_N 52..152 CDD:285627 17/93 (18%)
adm_rel 83..556 CDD:273620 92/497 (19%)
ADGF 135..548 CDD:238646 85/445 (19%)
ampd3bNP_956142.1 PLN03055 157..765 CDD:178613 99/522 (19%)
metallo-dependent_hydrolases 157..765 CDD:294200 99/522 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1816
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.