DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpx and cplx4a

DIOPT Version :10

Sequence 1:NP_001262248.1 Gene:cpx / 64877 FlyBaseID:FBgn0041605 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001070768.1 Gene:cplx4a / 768157 ZFINID:ZDB-GENE-060526-116 Length:159 Species:Danio rerio


Alignment Length:132 Identity:40/132 - (30%)
Similarity:61/132 - (46%) Gaps:31/132 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AFIAKQMVGNQLSAVKGAVGGDGGDDGDDKEKAEEE------------ERERQEAIKEAEDRRKE 55
            ||:.|.||||.|   || :|..|||     ||||||            ..|.:|..|:..:.:.|
Zfish     2 AFLIKSMVGNPL---KG-MGLGGGD-----EKAEEETPKDPAAAAGMTREEYEEYQKQLVEEKME 57

  Fly    56 K-----HRKMEEEREKMRQDIRDKYNIKKKEE---IVEAAPQEEPNPLMRKKKTPEELAAEAEQE 112
            :     |:|  .||..:|..:|:||.:.|.|:   :::.|..:...|....|...|:...|.|::
Zfish    58 RDADFLHKK--AERATLRVCLREKYRLPKSEQDENMLQMAGDDVDVPEELLKMVDEDATEEEEKD 120

  Fly   113 EL 114
            .:
Zfish   121 SI 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpxNP_001262248.1 Synaphin 2..124 CDD:461755 40/132 (30%)
cplx4aNP_001070768.1 Synaphin 1..139 CDD:461755 40/132 (30%)

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