DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpx and cplx4a

DIOPT Version :9

Sequence 1:NP_001262248.1 Gene:cpx / 64877 FlyBaseID:FBgn0041605 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001070768.1 Gene:cplx4a / 768157 ZFINID:ZDB-GENE-060526-116 Length:159 Species:Danio rerio


Alignment Length:132 Identity:40/132 - (30%)
Similarity:61/132 - (46%) Gaps:31/132 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AFIAKQMVGNQLSAVKGAVGGDGGDDGDDKEKAEEE------------ERERQEAIKEAEDRRKE 55
            ||:.|.||||.|   || :|..|||     ||||||            ..|.:|..|:..:.:.|
Zfish     2 AFLIKSMVGNPL---KG-MGLGGGD-----EKAEEETPKDPAAAAGMTREEYEEYQKQLVEEKME 57

  Fly    56 K-----HRKMEEEREKMRQDIRDKYNIKKKEE---IVEAAPQEEPNPLMRKKKTPEELAAEAEQE 112
            :     |:|  .||..:|..:|:||.:.|.|:   :::.|..:...|....|...|:...|.|::
Zfish    58 RDADFLHKK--AERATLRVCLREKYRLPKSEQDENMLQMAGDDVDVPEELLKMVDEDATEEEEKD 120

  Fly   113 EL 114
            .:
Zfish   121 SI 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpxNP_001262248.1 Synaphin 2..124 CDD:283491 40/132 (30%)
cplx4aNP_001070768.1 Synaphin 1..139 CDD:283491 40/132 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590064
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16705
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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