DRSC/TRiP Functional Genomics Resources

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Protein Alignment cpx and cplx3a

DIOPT Version :10

Sequence 1:NP_001262248.1 Gene:cpx / 64877 FlyBaseID:FBgn0041605 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001165054.1 Gene:cplx3a / 556533 ZFINID:ZDB-GENE-090313-349 Length:155 Species:Danio rerio


Alignment Length:123 Identity:38/123 - (30%)
Similarity:55/123 - (44%) Gaps:23/123 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AFIAKQMVGNQLSAVKGAVGGDGGDDGDDKEKA-----EEEERERQEAIKEAEDRRKEKHRKMEE 62
            ||:.|.|:|.||..:.|  |.:...:|:..|.|     :||..:.|:.:.|.:..|.....:.:.
Zfish     2 AFMLKHMIGGQLKDLTG--GLEEKPEGEKTEAAAKGMTQEEFEQYQQQLAEEKLERDANFAQKKA 64

  Fly    63 EREKMRQDIRDKYNIKKKE----EIVEAAPQEEPNPLMRKKKTPEELA---AEAEQEE 113
            ||..:|...|:||.:.|.|    :|..||...|         .|.|||   ||..|||
Zfish    65 ERATVRSHFREKYRLPKSELDDTQIQAAADDVE---------LPTELAKMIAEDNQEE 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpxNP_001262248.1 Synaphin 2..124 CDD:461755 38/123 (31%)
cplx3aNP_001165054.1 Synaphin 1..136 CDD:461755 38/123 (31%)

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