DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cpx and cplx2a

DIOPT Version :10

Sequence 1:NP_001262248.1 Gene:cpx / 64877 FlyBaseID:FBgn0041605 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_001002459.1 Gene:cplx2a / 436732 ZFINID:ZDB-GENE-040718-160 Length:133 Species:Danio rerio


Alignment Length:119 Identity:51/119 - (42%)
Similarity:67/119 - (56%) Gaps:13/119 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VKGAVGGD--------GGDDGDDKEKAEEEERERQEAIKEAEDRRKEKHRKMEEEREKMRQDIRD 73
            :|.|:||.        ||::..|.|..:|:|.|||||:::.|:.||.||.|||.|||.:||.|||
Zfish     5 LKAAMGGGPPDVGKMLGGEEDKDPEAEKEKEEERQEALRQEEEERKAKHAKMEAERENIRQGIRD 69

  Fly    74 KYNIKKKE--EIVEAAPQE---EPNPLMRKKKTPEELAAEAEQEELDDFTSKSL 122
            ||.|||:|  |..|||..|   |.:....||..|.....:.|:|.:.|...|.|
Zfish    70 KYGIKKREVAEAEEAAAMEQACEGSMTRPKKAVPSGCGDDDEEENIMDTVMKYL 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cpxNP_001262248.1 Synaphin 2..124 CDD:461755 51/119 (43%)
cplx2aNP_001002459.1 Synaphin 1..132 CDD:461755 51/119 (43%)

Return to query results.
Submit another query.